Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_II0406 |
Symbol | |
ID | 6961842 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011313 |
Strand | - |
Start bp | 457152 |
End bp | 459068 |
Gene Length | 1917 bp |
Protein Length | 638 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 643381701 |
Product | glutathione-regulated potassium-efflux system protein |
Protein accession | YP_002264743 |
Protein GI | 209809205 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0475] Kef-type K+ transport systems, membrane components [COG0569] K+ transport systems, NAD-binding component |
TIGRFAM ID | [TIGR00932] transporter, monovalent cation:proton antiporter-2 (CPA2) family |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0122767 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGGAT ATTTTCTACA AGCCTTCATT TATCTTGTTG CCGCCGTGAT TGCCGTTCCA ATAGCAAAGC GTTTAGGACT TGGTTCCGTT CTCGGTTACT TAATCGCGGG TGTCGTTATT GGCCCGATCA TCGGTCTTGT AGGTGAAGAA ACCACAACCA TCCAACACTT TGCTGAATTT GGTGTGGTCA TGATGCTATT TTTGGTGGGT CTTGAACTAG AGCCGAAAAT GCTCTGGGCA ATGCGCAACC GTTTAATGGG ATTAGGGGGG CTTCAAGTTG GAGGAACCAC CGCCATTGTG ATGGCTATTG CGATGTTCTT TGGTCAATCT TGGACTATCG CCCTCACTAT TGGTCTTATT TTTGCTCTTT CATCTACCGC TATCGTTCTG CAAACCTTTA ATGAAAAAGG CTTAGCAAAA ACAGAAGGCG GCAAAAATGC ATTCTCTGTT CTGCTTTTCC AAGATATTGC CGTCATTCCA ATGCTGGCTT TCATCCCACT CTTAGCCTTA CCAGAATTGG TTGAGAAAGC ACAGCTTGCC GCGGCAAATG CCGCAGAGCA CCATGAAGAA ATCAGCTTAG TCGTAGGGCT ACCTGGCTGG GCTTACGGTA TCGTAATTAC GGCTTCTATT GCCATCGTTG TGGTTGGTGG ACATTACTTA AGTCGTCCTC TTTTTCGCTT TGTGGCGAGT TCTGGGTTAC GCGAAATATT TACTGCAACC GCACTAATGT TAGTCATCGG TATTGCCGCA TTAATGAGTT TAGTGGGGCT ATCTCCTGCG CTTGGTACAT TCTTAGCCGG TGTCGTCTTA GCCAACTCAG AGTTCAGGCA CGAATTAGAA TCAAACATAG ATCCCTTCAA AGGGCTTCTA TTAGGCCTCT TCTTTATTAC TGTTGGCGCA GGAATTGATT TTGGCATTTT GTTTGATGAT TTTTTTACCA TTATTGGTCT TACGATTGGC GTTATGGCAT TAAAAGCACT TGTGTTGTTT GCCTTAGCGG TCATCTTTAA AATCAAAAAC AGTGACCGTT GGTTATTTGC GTTAAGTCTC GCCCAAGCCG GTGAATTTGG CTTTGTACTG TTAAGCTTTA CAGTACAAAA TAACGTATTA CCACCAGAAG TTGCTCAACC ATTATCTTTA GTTGTTGCAC TGTCTATGTT TTTAACGCCT GGTTTATTCA TTTTATTTGA TAAAGTGATC TTGCCTCGCT ATGAGCAAAA ATCAAATGAT CGCGAAGCCG ACCTCATTGA AGAAAAAGGC ACTGTGATTA TTGCCGGTGG CGGTCGCTTT GGTCAGGTTA TTAACCGTTT CTTGGTCTCA AACCATGTTA AAACCGTCGT ACTTGATCAT CAAGCAAGCC AAGTAGATGC CCTACGTGAA GTAAACACAA AAAGCTACTA TGGTGATGCT ACTCGTCCTG AATTACTTCA TACCGCAGGA ATAGAACACG CCGCAATGCT TGTTGTTGCC ATCGATAATC AAGAAAGTAG CGTAGAAATC GTTAAGTACG TAAAACACAT GTACCCCAAC GTAAAAATCT TAGCTCGAGC ATTTGATAGA GGCCATTCCT ACATGCTACG TTGCGCTGGT GCTGATTTTA TTGAATCAGA AACCATGCGT TCAGCGTTAG AAATGGGCGC AGAGGCAATG CGTTCTCTTG GCCAACATCC TTTCCATGTT GAACAGCAAA AGATTGCCTA TAAGAATGTT GAGAATCAAA GTTCTGACAC CTTATATCAA GCCTGGGTCG ATGATTCAGA AGGCGATCGT TACGATAATA ACTACCGTAA ACTCTTCATT GAATTAGAAG GCACAATCAA ACAAGCGATG AGTAAAGACC GCTCTGATAA ACACAATCAA TCAGAACGCG CATGGACACC GCCACCAAAA GGCTATGCCG ATAAAATAGA AGACTAA
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Protein sequence | MTGYFLQAFI YLVAAVIAVP IAKRLGLGSV LGYLIAGVVI GPIIGLVGEE TTTIQHFAEF GVVMMLFLVG LELEPKMLWA MRNRLMGLGG LQVGGTTAIV MAIAMFFGQS WTIALTIGLI FALSSTAIVL QTFNEKGLAK TEGGKNAFSV LLFQDIAVIP MLAFIPLLAL PELVEKAQLA AANAAEHHEE ISLVVGLPGW AYGIVITASI AIVVVGGHYL SRPLFRFVAS SGLREIFTAT ALMLVIGIAA LMSLVGLSPA LGTFLAGVVL ANSEFRHELE SNIDPFKGLL LGLFFITVGA GIDFGILFDD FFTIIGLTIG VMALKALVLF ALAVIFKIKN SDRWLFALSL AQAGEFGFVL LSFTVQNNVL PPEVAQPLSL VVALSMFLTP GLFILFDKVI LPRYEQKSND READLIEEKG TVIIAGGGRF GQVINRFLVS NHVKTVVLDH QASQVDALRE VNTKSYYGDA TRPELLHTAG IEHAAMLVVA IDNQESSVEI VKYVKHMYPN VKILARAFDR GHSYMLRCAG ADFIESETMR SALEMGAEAM RSLGQHPFHV EQQKIAYKNV ENQSSDTLYQ AWVDDSEGDR YDNNYRKLFI ELEGTIKQAM SKDRSDKHNQ SERAWTPPPK GYADKIED
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