Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_II0393x |
Symbol | |
ID | 7072199 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011313 |
Strand | - |
Start bp | 436664 |
End bp | 439495 |
Gene Length | 2832 bp |
Protein Length | 943 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 643381688 |
Product | response regulator, histidine kinase |
Protein accession | YP_002264730 |
Protein GI | 209809192 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG0784] FOG: CheY-like receiver |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.621999 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATATTAA TTAATACGAA CAAACTCAGT CTTATATTGA TCGCATTTAT TACCTGTGCT GCTCTGTATT TGTCGTTGAT TGTCACCAAA AGTCATTTGG TCGAACAATA TCAACGTGCT TATTTATCAT TGTCTGACAA CATCATTCAA TCTAGAGAAA GTCTCTATTA TTTTAATCAT CAAGACAATA AAGCCTATGA CTCTTACTCA TCTCAGCTGG TCAATGCCGA TCTAAAAGCC TCTTTCCTTT CTGAACACTT AGACAATGAC CAAAACCATT GGTTATCAAG TTTTCTCATT AGTAGTGATC AAGCCGTTAT TTATGCAAAA AACACTCAAG TAAGCGTCTC GACCTTAGTT AACGATCTAG AAACACTATT GAGATTAAAA GTCTCATACG AGTATTCAAC ACTAACTGCC TTACTATTAG AAAAAAAACT ATTAACTACC CTACCAAAAC TAGAAGATAA ACTGTATGTC TCACAATTTA CATTAACGGG TTTAATGAGC TCTCCGCCCA GTAATGAATT AAAAAACCAA GTTGGGTTTA AAAGCTTATC TAATTACATC GCCTTTCGTG AACGTATTAA AGTCGAAAGT AAAAACAAAG AAAAAGACAT TTTTACCAAC AATGTAAAAC AAATGCTGAC ACAGAAAAAT AATTATTGGT TATCTCAATC CGAATCAATA AAGAATCATA TGTTCATTAC CGTTATACTA TTTATCTGCG CGATTGCCGC CTACTTCTAT CTTCAATTAC GTGAACGGTT ACAACAAACC TTAATTATAA AAAGAGAACT GGTAAACTCA GAAAAAGAAA AATCGAAGCT TGCCCTTGTT GCCGAGCATG CACACGATGC CATTCTTATT ACCGACAACA ATGGCATGTT AACATGGGCA AACCAAAGTT TTTCTACACT CTCAGGCTTC CAACTCAATG AAGTACTAGG AAAGAAACCA GGAGATCTCT TACAGGGAGA AAACACCTCA AAAGACGACA TTGCACGCAT CTCTGCCGCC ATCAAAAAAG GGGCCGCGAT TGAATCAGAA TTAATCAATT ATCATAAAGA CGGCTCAGAG TACTGGATAG GTATGTCCAT TACCCCCACC TTTAATTCTG ATGGCTCAGT AGAGCAGTTC ATTGCGGTAG AAAGAGACAT CACCAAGCGT AAAGCCCTTG AAATTGATTT ATTCAATGCA GCAGAACAAG CGGAAGTATC CAACAAAGCC AAATCAACTT TCTTAGCAAC CATGAGTCAT GAATTAAGAA CGCCACTTAA CGGTATTTTA GGCATGGCAC AAATCATCGA AAGTAATATA AAAGATCCCG AACAACACAA ACAGATTAAC GTTCTACTCG AATCAGGAGA TCACCTACTT TCTTTACTTA ATGACATTCT TGATTTCTCT AAAATTGAAC AAAATAAACT GGAATTAGAT AACCTTCCTT TTGATTTTAA AGATGTGATT AGTCCTATTG CAAATACCTA CATCCCGATC TGTGAAGATA AAGGATTAGA ATTAATTATC CATGACCAGA TTAATGCGGG TGCCGTATTT AATGGTGACA AACCTCGAAT TCGACAAATC ATCTTCAACT TAATCAGTAA TGCCGTAAAG TTCACCCATA AAGGCAGTAT CACATTAACC TTCAGTCACA CCCTTACCGC AAAAAGTAAA CAAGGTCTGC TTATCAAAAT AGAAGACAGT GGTATTGGCA TACGCGAAGA GCGGCTTGAC TATATCTTTG ATCCTTTCAT TCAAGCAGAA TCAGCAACAA CACGACAATA TGGTGGAACC GGGTTAGGCT TGGCGATAGT GAAACAACTC GTTGATGCTA TGCAAGGTTA TATTTCAGTA AAAAGCGTTG AAGGAGAAGG CACTGGCTTT ACTATTATGC TGCCACTTGA AACCGTTATA AAAAAACAAA TTCACAAAGA AAAAATTCCC GAAGCGCTTA TCTCTAATGA CAATGAAGAA CTCGTCCATC AAAAATTATC GATTTTAGTC GCCGAAGACA ATAAAGTGAA TGCTCTGGTC GCCAAAATGT TTTGTGAGCG TTTGGGGCAT CAAGTCGTCG TTGTCGAAAA TGGACAGCTT GCAATAGAAG CCTTAAGGTT ACAGGTATTT GATCTGATCA TTATGGATAA TCACATGCCG ATCATGGACG GTATTAGCGC AACAAAGATC ATCAGAAAAG AGCTTAAACT GCCCACCGTT ATTTTTGCCT GTACCGCCGA TGTATTCCAA GAAGCCCATG ATAATTTCAT TGAAGCGGGC GCAAACTACG TATTAACGAA GCCTCTTCAA GAACAAGGAT TTATGGATGC AATAAAACAA CATCAACAGT TAATTACTCG TAATAATACA GAAACCAAAC CATTCGATAA ATCGACTGAA AATGTCATCG AATTAAAACG TCATTCAAAA GAAAAAATAA CGACATTAGC ACTCACCGAA GCCGAGTTAA GCTTAGTATC ATTAATTGCT ATTTGTGGTG ACGATAATGA TATTTTAGAT GAGTTCTTAC TGTCATTTAT TGATATCTCC GAAGAGAGCA TTACTTCATT AATCACCGCT TATGACAATA AAGAAATTGC AAATATTCGC TTACATTCCC ATTCAGTAAA AGGAATGGCA AGTAACTTTG ATGCACTCCG CCTTGTTGAA AGCGCAACAT CCATTGAAAT GTTGACGAAA GTAGGTTTAA TGCCTGAACT GAATGACATA CAACAACTTA TCAATTTGTT AGAAGTAAAC ATTCAACAAG CTGTCCGTTT ATTACACAGA AATATCAATA AAAAAACAAA TAATGTTCAT GTTTATCCGT AA
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Protein sequence | MILINTNKLS LILIAFITCA ALYLSLIVTK SHLVEQYQRA YLSLSDNIIQ SRESLYYFNH QDNKAYDSYS SQLVNADLKA SFLSEHLDND QNHWLSSFLI SSDQAVIYAK NTQVSVSTLV NDLETLLRLK VSYEYSTLTA LLLEKKLLTT LPKLEDKLYV SQFTLTGLMS SPPSNELKNQ VGFKSLSNYI AFRERIKVES KNKEKDIFTN NVKQMLTQKN NYWLSQSESI KNHMFITVIL FICAIAAYFY LQLRERLQQT LIIKRELVNS EKEKSKLALV AEHAHDAILI TDNNGMLTWA NQSFSTLSGF QLNEVLGKKP GDLLQGENTS KDDIARISAA IKKGAAIESE LINYHKDGSE YWIGMSITPT FNSDGSVEQF IAVERDITKR KALEIDLFNA AEQAEVSNKA KSTFLATMSH ELRTPLNGIL GMAQIIESNI KDPEQHKQIN VLLESGDHLL SLLNDILDFS KIEQNKLELD NLPFDFKDVI SPIANTYIPI CEDKGLELII HDQINAGAVF NGDKPRIRQI IFNLISNAVK FTHKGSITLT FSHTLTAKSK QGLLIKIEDS GIGIREERLD YIFDPFIQAE SATTRQYGGT GLGLAIVKQL VDAMQGYISV KSVEGEGTGF TIMLPLETVI KKQIHKEKIP EALISNDNEE LVHQKLSILV AEDNKVNALV AKMFCERLGH QVVVVENGQL AIEALRLQVF DLIIMDNHMP IMDGISATKI IRKELKLPTV IFACTADVFQ EAHDNFIEAG ANYVLTKPLQ EQGFMDAIKQ HQQLITRNNT ETKPFDKSTE NVIELKRHSK EKITTLALTE AELSLVSLIA ICGDDNDILD EFLLSFIDIS EESITSLITA YDNKEIANIR LHSHSVKGMA SNFDALRLVE SATSIEMLTK VGLMPELNDI QQLINLLEVN IQQAVRLLHR NINKKTNNVH VYP
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