| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0392 |
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| Symbol | |
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| ID | 6961832 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | - |
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| Start bp | 434825 |
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| End bp | 436501 |
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| Gene Length | 1677 bp |
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| Protein Length | 558 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 643381687 |
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| Product | putative signaling protein |
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| Protein accession | YP_002264729 |
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| Protein GI | 209809191 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain
[COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTGAGA ATAAATACTT CATTTATCAG CCTAATTTCT TTGAAGGTTC TATTGTCTCT
TATGAAGCAC TACTAAGATT CAAAAATTCT GACGAATCGC CTTTGCACTT CATTTCTACG
ATTGAAGATA AAGAGAACTT TGATAAAGCC GTAATCTCTC AAGTACTTTC CGACAAATTA
AGCTTAAAGA ACCCAAAAAA CATTAATCTA TCCATTAACA TTTTTGCCCA AAGCTTAGTC
TCAGAATCAT TTATTGAATA TTGTGAATCC GTGTTCCAAA AACACAAAGG GTTTACCTTA
GAGTTGAACT TCAATCATCA ACAGTTTGAC TTAGAAAAAA TTCGCTTGAA TATGCAGTGC
TTAAAAAATC TAGGGGTTCT TTTTACCTTA GATGATTATG GTACAGAATG TGTTAATTCT
GACCCCTTGT TAGACTTAAA CTTTGACTAT ATAAAAATAG ACCGTTCTCT TATTAGCACC
ATCAGTGATG ATTATTTATC GTTTTGTTTT TTACGTTCTC TTTACCACAA ATTGAATAAA
TTTTTAGGTA ATACAGTCAT AATAAAGGGC ATAGAAAACG TTAATCAATT AAACTTGATT
AACTCTTTTG ACTCAGTGAT AGCACAAGGT TGTCACCTTT CATACCCATT GCCGTTGTCT
GCTCTTGACG ATAACCTTGA TACACAAGCA GAACAATCGT TAAACAAAGT GAATTCGGAA
AACCCACCAA TCGACCGTTT TATTTACAAT ATTAATATTG CAAAAAACGA AGCCGAATTA
GCCGCCGCTT TAGAGCTCTT CAAGCCTCAA GACCCATTCA ATTTATTAGG TATTGATTAC
AATAATTTTG ATCTGGACGC ACTCAATCGA AAGTACCAAG AATTATTAGA TGGCATTAAA
AGCCCCTCAA TTCTATTCAC TACCAATTTA ATGAAGCATT GTAATTGCCT TTTTATCTTA
AGAGACGAAC AAGGTGTGGC CATTTATAAC AGTAAAAAGC ATGTCGATTA TTTAGAATGT
GATTTAGTTG GGATGTCTCC CGATGATGTA CTCGCTCGAT TCCCAGATTA TCAAATGTGC
TTACAGCTTG ATCAGCAGTT ATTAAATAAT GACTCCGATA TTTTAATGTC CAATGAAACG
GTTGAAGTCG GTTCACAAAC CACACACTTC CACACCTATC GCCAAAAGAT AAAATATTTC
GATAAGACAT TTATTATGAT TTTTGTATAT GAAGATACGC AGGATACACA AACATCCATT
GATCCTTTGA CAGGCAGTTT TACAAAATCA AAATTAGAAT GTCTTGATAT TAATACCTAT
AAATCCTTGG TCTTTATTGA TTTGGATGGA TTTAAAAATA TCAATGATAA GCTTGGTCAT
CAACTCGGGG ATTTACAGCT AAAAGAAGCG GCTCGATTAC TGAAACAGTA CTTAAGAAAA
GAAGACCTTC TAATTCGATT TGGAGGTGAT GAATTTGTAC TTTGCTTTAA CTCGTATTCT
GTTGAGGATA TTCACGCGAA AATGTTAGTC ATTCGATCGC ATTTCGAGCG CTATTTTGAA
GAAAAAGACA TGTATCTCTC CTTTTCATTT GGCACCGCTT TAATTCATAC CGATGTTAAA
GAGGCTTTGG ATCTTGCCGA CCAACTGATG TATACAGAAA AAAGCCTCAA AATATGA
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| Protein sequence | MLENKYFIYQ PNFFEGSIVS YEALLRFKNS DESPLHFIST IEDKENFDKA VISQVLSDKL
SLKNPKNINL SINIFAQSLV SESFIEYCES VFQKHKGFTL ELNFNHQQFD LEKIRLNMQC
LKNLGVLFTL DDYGTECVNS DPLLDLNFDY IKIDRSLIST ISDDYLSFCF LRSLYHKLNK
FLGNTVIIKG IENVNQLNLI NSFDSVIAQG CHLSYPLPLS ALDDNLDTQA EQSLNKVNSE
NPPIDRFIYN INIAKNEAEL AAALELFKPQ DPFNLLGIDY NNFDLDALNR KYQELLDGIK
SPSILFTTNL MKHCNCLFIL RDEQGVAIYN SKKHVDYLEC DLVGMSPDDV LARFPDYQMC
LQLDQQLLNN DSDILMSNET VEVGSQTTHF HTYRQKIKYF DKTFIMIFVY EDTQDTQTSI
DPLTGSFTKS KLECLDINTY KSLVFIDLDG FKNINDKLGH QLGDLQLKEA ARLLKQYLRK
EDLLIRFGGD EFVLCFNSYS VEDIHAKMLV IRSHFERYFE EKDMYLSFSF GTALIHTDVK
EALDLADQLM YTEKSLKI
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