| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0386 |
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| Symbol | glpR |
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| ID | 6962476 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | + |
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| Start bp | 428748 |
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| End bp | 429515 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 643381682 |
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| Product | glycerol-3-phosphate repressor protein |
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| Protein accession | YP_002264724 |
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| Protein GI | 209809186 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGAAGCAAA TATCAAGACA TCAAGAAATT GTGAATTTAG TGCAACAGCA TGGTTATGTC
AGTACTGAAG ATTTAGTGGA GCAATTCAAA GTCAGTCCAC AAACAATTCG CCGTGATTTA
AACGAATTAG CAGATGAGAA CAAAATACGC CGTCATCATG GTGGTGCAAC GATCCCTCTT
AGCTCTGTAA ATACGGCTTA CACTACACGT AAAGTGATGC AGTTGAATGA GAAAGACACG
ATTGCAGAAG CGCTTGCAAA GCATATTCCT GATGGCGCTA CGTTGTTTAT CGATATTGGT
ACGACACCAG AATCGGTAGC AAAAGCCTTA GTCAAAAACC ATAAGGATTT ACGCGTTGTT
ACCAACAACA TTAACGTAGC GATGATCTTA ATGGCGAATC CCGATTTTAA AGTGATTCTG
GCTGGTGGTG AAGTTCGTAA TCGTGATGGG GGTATTGTTG GTGAAGCAAC CCTTGATTTC
ATTAAACAGT TCCGTTTGGA TTTTGGCATA TTAGGGATCA GTGGTATTGA TTATGATGGT
TCACTGTTGG ATTTTGATTA CCACGAAGTT CGAGTGAAAA AAGCGATCAT TGAAAACAGC
CGCAGTGTGT ACCTTGCGGT TGATCATACT AAGTTTGGTC GTAATGCGAT GGTTAATTTA
GGAAGTATTA CTGAATTGCA CATGATCATT ACCGACCAAG AGCCACCTGA AGAAATAGTG
ACTATTTTGA AAGAAAATGA AATCCCTTAT GAAGTAATTT CAAAGTAG
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| Protein sequence | MKQISRHQEI VNLVQQHGYV STEDLVEQFK VSPQTIRRDL NELADENKIR RHHGGATIPL
SSVNTAYTTR KVMQLNEKDT IAEALAKHIP DGATLFIDIG TTPESVAKAL VKNHKDLRVV
TNNINVAMIL MANPDFKVIL AGGEVRNRDG GIVGEATLDF IKQFRLDFGI LGISGIDYDG
SLLDFDYHEV RVKKAIIENS RSVYLAVDHT KFGRNAMVNL GSITELHMII TDQEPPEEIV
TILKENEIPY EVISK
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