| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0384 |
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| Symbol | glpF |
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| ID | 6961828 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | + |
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| Start bp | 426108 |
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| End bp | 426962 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 643381680 |
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| Product | glycerol uptake facilitator protein |
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| Protein accession | YP_002264722 |
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| Protein GI | 209809184 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) |
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| TIGRFAM ID | [TIGR00861] MIP family channel proteins |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.418128 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCGAATA ATGAACAACA TACATTACTT GGACAATGCA TCGCTGAATT TATCGGTGCC
GGTTTATTGA TTTTTTTTGG TGTCGGCTGT GTCGCTGCCT TAGTGTTAAC GGGGGCTGAG
TTTGGCCAAT GGGAAGTCAG TATTATATGG GGGATAGGTG TTTCTATTGC CATCTATTGT
ACTGCGGGTG TTTCTGGTGC TCACCTTAAT CCTGCTGTAA CTATTGCACT GGCTGCGTTT
CATGGATTTG ATAAAGCAAA AGTAATCCCT TATATCATTG CTCAAGTACT TGGTGCTTTT
TGCTCTGCTG CGTTAGTTTA CGCGTTATAC AGTAATTTAT TTGCTGATTA TGAAATTGCG
AATGGTTTTT TAAGAAGCAG TGAAGCTGCA TTATCAACGG CTGGTATCTT TTCTACTTAT
CCACACCCCT CTTTATCGAT ACTAGGCGCG TTTGCTGTTG AGTTTGTTAT TACTGCGGTT
CTTATGTTTG GCATCTTAGC ATTAGGTGAC GAGCATAATG GCGCGTCTCG TGGTGCAATG
AATCCTCTAC TTATCGGTTT ATTAATTGCC GTGATTGGTG GGTCTCTTGG GCCTCTAACT
GGCTTTGCAA TGAACCCTGC TCGTGATTTT GGTCCAAAAC TCTTTGCTTA CTTAGCGGGT
TGGGATTATG CATTAACAGG TGCGAGAGAG ATTCCTTACT TTATTGTTCC AATTCTTGCT
CCTATTGCTG GTGCGTGTTT TGGTGGTTGG GCTTACCCAA AACTGATTGG TGCTTATTTA
CCAAAAGCTG GGCATGGTTG TACTATTCCT AATCAGTGTG ATCCAGAAGA CGAAACTAAA
ACTGCTGAAG TGTAA
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| Protein sequence | MANNEQHTLL GQCIAEFIGA GLLIFFGVGC VAALVLTGAE FGQWEVSIIW GIGVSIAIYC
TAGVSGAHLN PAVTIALAAF HGFDKAKVIP YIIAQVLGAF CSAALVYALY SNLFADYEIA
NGFLRSSEAA LSTAGIFSTY PHPSLSILGA FAVEFVITAV LMFGILALGD EHNGASRGAM
NPLLIGLLIA VIGGSLGPLT GFAMNPARDF GPKLFAYLAG WDYALTGARE IPYFIVPILA
PIAGACFGGW AYPKLIGAYL PKAGHGCTIP NQCDPEDETK TAEV
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