Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_II0383 |
Symbol | |
ID | 6961827 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011313 |
Strand | + |
Start bp | 424775 |
End bp | 425635 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 643381679 |
Product | hypothetical protein |
Protein accession | YP_002264721 |
Protein GI | 209809183 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0775] Nucleoside phosphorylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.637251 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCTTTA TTAAAGGCTT TTTAATTACT TTACTTACGT TACCTTTGAG TCTTTCTGCT GTGGCAGGGA TGAAAAGTGT GACTGTTGAA GGTAATTCTT ACGCAGCACC GCAACCCATT ATTATTCAAG GGCCTATGCC TATTGAAGCT CAACATTTTG CTGCATTACT TGATGATGTC ACGATCGAAA AAACGGGGAT TTTTGTTTTT TATAAAGGCA CGCTAAATGG ATACCCTGTC ATTGTAAGCC AAACAGGGAA GGGTTTAGAG AACACGGCGG CGGCAACGGC GATAGCGATA GAGCGCTATA AACCAATAGC TATTATTAAT CAGGGGACTT CTGGTGGGCA TGATAAAAAC TTAAATGTTG CAGATATTGT TCTAGGTAAG AGAACGGTAA ATATAGGTAA TTTAAAAACA CCGAAAGCGA AAGAAGGTGA AGGCTCTAAT TCACTCACTT GGATCCCGAT GGATATTATG GCTTCTGCTG GTACCGCTGG TGGTGATGAT GCAAATAAAA TTCGTTACTA TGAAGGGAGC AGTGAATTAA TTGCTTCTGC TCATAAAGTG AAATACACCG AAGGAAAAGT GGTTGAAGGG ACGATTGGTT CTGCGAATTT TTGGAACAGT GAGTTAGATC GTATTAATTG GTTCCATGAT AACTTTGGTA CAAGTACTGA AGAAATGGAA AGTGCGTCTG CGGCTCAAAT CAGTGAAGCG TATCACGTTC CATTCTTAGC GATTCGTATT TTATCAAACA ACATTACTAA TGGTGGTCAT TACAATCCTA ATACCGCGAA ATATTGCCAA TCTTATGTAA AAGAGGTTGT AGTTCAATAT ATTAGCGATA TAAATAAGTA A
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Protein sequence | MRFIKGFLIT LLTLPLSLSA VAGMKSVTVE GNSYAAPQPI IIQGPMPIEA QHFAALLDDV TIEKTGIFVF YKGTLNGYPV IVSQTGKGLE NTAAATAIAI ERYKPIAIIN QGTSGGHDKN LNVADIVLGK RTVNIGNLKT PKAKEGEGSN SLTWIPMDIM ASAGTAGGDD ANKIRYYEGS SELIASAHKV KYTEGKVVEG TIGSANFWNS ELDRINWFHD NFGTSTEEME SASAAQISEA YHVPFLAIRI LSNNITNGGH YNPNTAKYCQ SYVKEVVVQY ISDINK
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