| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0376 |
|---|
| Symbol | tadE |
|---|
| ID | 6962593 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aliivibrio salmonicida LFI1238 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011313 |
|---|
| Strand | + |
|---|
| Start bp | 417828 |
|---|
| End bp | 418316 |
|---|
| Gene Length | 489 bp |
|---|
| Protein Length | 162 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 643381673 |
|---|
| Product | membrane associated secretion system protein |
|---|
| Protein accession | YP_002264715 |
|---|
| Protein GI | 209809177 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.035818 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAATCA ATAAACAGAA AGGGACTGCC AGTATTGAAT TCGTTTTGGG GTTTATGGCT
TTTTGGCTCA TTTGTATGGC ATGGGTTGAG ATGAGTTATA TGTCTTATAT CTCAGCTATC
AGTGATTTAA TTGTTTCAGA ATCCGCTCGT GAATCAAAAA CAGAAGAAGC GGACTACTTG
GATTCTTTTA ACCGAGCCAT TACTGAGAAT CAATCGTTAT GGGGAAGCGT TGTTGATCCA
ACTAAATTTA CGATGTCGAT TCAATATCTT GAAAGTGTCA ATGAATTAGG TGGTTTAGTT
GATCCATGCG TGGTGCCTGA TGCCGAAGTC ACTGCTGAAT GTGGTGAATC AGAAAACAGA
GCCATCGCGG TTTATCGGAT AGATTATCGT TTTTCTTCTA TTTTTACGTA TTTTGTCGAC
ACGGAAAGTC TTTTTAGTCG TGAAGTTATT GTTATTCAGG AGTACGAGCG TGATGCCTTT
GAGATTTAA
|
|---|
| Protein sequence | MRINKQKGTA SIEFVLGFMA FWLICMAWVE MSYMSYISAI SDLIVSESAR ESKTEEADYL
DSFNRAITEN QSLWGSVVDP TKFTMSIQYL ESVNELGGLV DPCVVPDAEV TAECGESENR
AIAVYRIDYR FSSIFTYFVD TESLFSREVI VIQEYERDAF EI
|
|---|
| |