| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0329 |
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| Symbol | |
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| ID | 6961784 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | - |
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| Start bp | 371605 |
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| End bp | 372852 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643381630 |
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| Product | putative response regulator |
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| Protein accession | YP_002264672 |
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| Protein GI | 209809134 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATACA TTTTAGTAGT AGACGATGAC CCGGTTAGTC TTCTTTTCAT GTCATCTCTA
TTAAAACGTT GCGGATTCAA TATTATCTCT GCCAAAAATG GCTTAGAGGC TATGTCTATT
TTGGCAGAAA ATCCACACAT TCAATTTGTG CTAAGTGATT GGATAATGCC TGAAATGGAT
GGCATTGAAT TATGTACTAA ATTAAAAGAG ATCGAGTTTG ATCGTTACAT TTTCTTTGTC
CTTCTTTCTG GTAAAAACGA CCAAAGATCC ATCATTGATG GTATCAATGC GGGCGCGGAT
GATTTCATTG TTAAAGGGGC TGATGTAAAA GAATTAGAAG CACGAGTTAA AGCGGGATTC
AGAACCTTAG AATTACATAA TAAAATCACA GATAAAAATC AAGAGCTCGA CTCAGCTTAC
GCCACAATAC GTAAAGATCT TGATGCAGCA GGCGATCTCG TTCGTCAATT ATTACCCACT
CAAACCAATT TCACTGGGGT TGAGCTTAAC TATATATCCA TTCCAAGCGC TCAAATTGGC
GGTGATATGT TGGGCTATAT GCAACTTGAC CCTGACCACC TTGCTTTCTA CTTATTTGAT
GTGGCAGGCC ATGGCGTTTC ATCCGCTCTC ATGTCATTTT CTGTTCAGCA AAGTTTATCT
GTTATCGATG GGCCGTCGTC TATCGTTAAA GACGTAAATA ATAAAATTAT CCCACCAGAA
GAAGTCATCG ATAAATTAAA CAAGCTCTAC ATTAGTGACG ATAAAATTCA ACTTTATTTC
ACCATAGTTT ATGCCGTTCT TAATGTCAAA ACTGGGGAAG TAAATTATTG CTCAGCAGGG
CATCCCCCAC TGGTTTGGTT ACACCAAAAA ACCGAACAAG CCGAACTGGT TGGACACGAT
AACTTTGTAG TAGGGGCGTT TGATTTTGTT GAATATCAAT CTGCCAGCAT ACAGTTAGAT
CCTGGCGATA AAATATGGCT TTATTCTGAC GGGATTACCG AAGCCGAAAA AGACAACATA
CAATTTTCTG AAGATGGGCT TAGAAAAACC ATTATGGATA TTCGCTCCCA TCCCACTCAT
TTACAAACCG AACTGCTCGT TAATAGAGTA AGGACATGGC ATGAATCTGA TACGTTTGAA
GATGATGTGA GTGTGCTTGC TGTAGGGTGG AAAGGCTATT CTAAACAAGA GGATGACTCA
TGCAATACGA AATTAACAAC CAAGGTAAAT GCACAATTCT TCAGGTAA
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| Protein sequence | MEYILVVDDD PVSLLFMSSL LKRCGFNIIS AKNGLEAMSI LAENPHIQFV LSDWIMPEMD
GIELCTKLKE IEFDRYIFFV LLSGKNDQRS IIDGINAGAD DFIVKGADVK ELEARVKAGF
RTLELHNKIT DKNQELDSAY ATIRKDLDAA GDLVRQLLPT QTNFTGVELN YISIPSAQIG
GDMLGYMQLD PDHLAFYLFD VAGHGVSSAL MSFSVQQSLS VIDGPSSIVK DVNNKIIPPE
EVIDKLNKLY ISDDKIQLYF TIVYAVLNVK TGEVNYCSAG HPPLVWLHQK TEQAELVGHD
NFVVGAFDFV EYQSASIQLD PGDKIWLYSD GITEAEKDNI QFSEDGLRKT IMDIRSHPTH
LQTELLVNRV RTWHESDTFE DDVSVLAVGW KGYSKQEDDS CNTKLTTKVN AQFFR
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