Gene VSAL_II0321 details

Gene Information

• Locus tag: VSAL_II0321
• ID: 6961776
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aliivibrio salmonicida LFI1238
• Kingdom: Bacteria
• Replicon accession: NC_011313
• Strand: +
• Start bp: 362701
• End bp: 364563
• Gene Length: 1863 bp
• Protein Length: 620 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 643381622
• Product: putative glycosyl transferase
• Protein accession: YP_002264664
• Protein GI: 209809126
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATTTTT ATTTCAATAA ATTCGAACAT CGAAAACCAC CAGAACCCGT ACCTCATAGT 
CACTCTAGGG AGTTACTGTA TCAGTATTTA GCGACGTGTA ATCTTACGCT TGGTATTTGG 
TATTTGTGGT GGCGTTGGAG TTTTGCTCTT AACTATGATG CATTGTGGTT TTCTCTTCCT 
CTTGCTTTTG CGGAGTCTTG TGCATTTATT GGTTCGCTAT TGTTTACCTT CAATTTATGG 
AAAACAAAAG ATGAACCAAA AAAAGAACCG CCGCATAAAA TTAAAGAGTG TGTATTAGAT 
ACAGAAGAAG ATAGATCAAT CAGTGTCGAT GTATTTTTTC CGTCGTACGA TGAAGAACCT 
GATCTGGTAA AACTGAGTAT TTTAGATGCT CAGAAAGTAA CTTATCCGCA TGACATTGAT 
ATTAATATTT TCATTCTTGA TGATGGCAAA CGTGAAACCA TGAAGGCACT CGCTAAAGAA 
ATGAATATTG GTTATATCAC TAGAGAAGGA AATACGGGAT TTAAAGCGGG TAACTTACGT 
AACGCAATGG AACAAACGTA CGGTGATTTT GTTGTTATTT GTGATGCAGA TACAAGACCA 
TTCTCAACTA TATTAGAGCA TACGTTAGGT TACTTTAGAG ATCCTGATGT TGCTTGGGTT 
CAAACTCCGC AATGGTTCTT TGATATTCCA GAAGGTGAGC GTTTACCCAC CTTTTTAACT 
CGAAAATTTG GTTCTTTTTC TGGAAGAATA GGCCGGGGTA TTGAGAAGTT TTATGGCCCT 
GTTACTTTGG GTGAAGATCC TTTCGTTAAT GATCCTCAAA TGTTCTATGA CGTAATACAG 
CGCCGCAGAA ATTGGGCAAA TGCCTCGTTT TGTTGTGGTG CAGGTTCTAT TCACCGTCGT 
GAAGCGGTGA TGGAAGCGGC ACTTCGTAGT TACAGTGAGC AAATAATTAA AGAACAATCT 
GAGATAGAAA CTCAAATCAG AAAAATGACG AAAGAGAAGT CGGTTGATAA AGATATTTCA 
GATAATTTAA AACAAGAAAT TTTCATTGAT ACCGAGTTTA CGCCGTATAA ATTTCACGTA 
TCAGAAGATT TGTATACCTC TCTGGTTTTA CACTCGGATT CAGAACGTAA TTGGCGATCA 
GTCATGCACC CTGAAGTTGA AAGTAAAATG CTTTCCCCTC AAGATTTACA AACATGGACA 
GTGCAGCGTT TTAAATATTC TGGCGGGTCT ATTGATATCT TTATGAATGA CAATCCTTTG 
TTTAGAAAAG GAATGAATCT CAAGCAGAAG ATCATGTATG GGGCGAGTTT TTGGTCTAAC 
TTATCAGCAG TATGGAATAT TATTTTCTTA TTGTGTCCAA TTGTTTATTT TCTTACCAGT 
ATCGCACCAG TAAGTGCTTA TGACGTTACT TTCTACATGC ATTTCTTACC GTTTGTTTTA 
ACCGCTGAAC TAGCAATGAT GGTCGGAACA TGGGGGGTGG CTGGTTATAA AGGAAAAACG 
AATTTCCTTT CCTTCTTCCC TGTTAACTTC AAAGCACTGT GGACGGTATT ACGTGGTAAA 
AAAATCAGTT TCCCAACGAC ACCAAAAGAA AGACAAACGG GTACTTTTTT AAAATTAGTT 
ATTCCTCAAA TGGGCGTATT TGGCTTAAGC CTATTTAGCT TGATCTATGC ATGGACCGGA 
TTTTCAACCG GATCATACGG AAGTTACTCA TTGGGTGGGT TAGTGCTGAA TACGTTTTGG 
ATCATTAATA ACATGATGGC AATGTGGGGC ATGATCGCTT CGGCGTTTTG GAATCCAGAA 
TCAAATGATG ACGAACAACA AGAATCAGAA CAAGGAAAAG AGGAAGTAGA ATATGGAATT 
TAA 

 

Protein sequence

MDFYFNKFEH RKPPEPVPHS HSRELLYQYL ATCNLTLGIW YLWWRWSFAL NYDALWFSLP 
LAFAESCAFI GSLLFTFNLW KTKDEPKKEP PHKIKECVLD TEEDRSISVD VFFPSYDEEP 
DLVKLSILDA QKVTYPHDID INIFILDDGK RETMKALAKE MNIGYITREG NTGFKAGNLR 
NAMEQTYGDF VVICDADTRP FSTILEHTLG YFRDPDVAWV QTPQWFFDIP EGERLPTFLT 
RKFGSFSGRI GRGIEKFYGP VTLGEDPFVN DPQMFYDVIQ RRRNWANASF CCGAGSIHRR 
EAVMEAALRS YSEQIIKEQS EIETQIRKMT KEKSVDKDIS DNLKQEIFID TEFTPYKFHV 
SEDLYTSLVL HSDSERNWRS VMHPEVESKM LSPQDLQTWT VQRFKYSGGS IDIFMNDNPL 
FRKGMNLKQK IMYGASFWSN LSAVWNIIFL LCPIVYFLTS IAPVSAYDVT FYMHFLPFVL 
TAELAMMVGT WGVAGYKGKT NFLSFFPVNF KALWTVLRGK KISFPTTPKE RQTGTFLKLV 
IPQMGVFGLS LFSLIYAWTG FSTGSYGSYS LGGLVLNTFW IINNMMAMWG MIASAFWNPE 
SNDDEQQESE QGKEEVEYGI