| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0310 |
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| Symbol | |
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| ID | 6961766 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | - |
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| Start bp | 347293 |
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| End bp | 349404 |
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| Gene Length | 2112 bp |
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| Protein Length | 703 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 643381611 |
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| Product | polysaccharide biosynthesis/export protein |
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| Protein accession | YP_002264653 |
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| Protein GI | 209809115 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTATTC TTCATATTCT ACTTATCACC ATTTTGTTCT CTACTGTCTC AATGGTGCAT
TCAAAAACTG TCGATGATGC CGTTCGCGTC GGAGATGTAA TTACCATCAT GCTACCTGGT
GAAGAATCGC TAAATAAAGC GTTCCAAGTA GATAAACAAG GACGCGTTAT TTTACCTGAA
ATCGGTCCTC TATTTGTCGC AGGGAAAACC GAAGCTCAAA TGGTATCAAG TGTAACTCTA
CGTTTAAAAA CCATATTGCA AGACTTGCGT AACCTACAAG TATTCATCAG TAAACGTCAG
TTAATCATTA ATATTCAAGG TTATGTAAAA CAACCGGGTG AATACACATT ATCAGATGGT
GATTCCGTTC AATTGGCCTT GTATGCCGCT GGGGGGCTAC GCTCAGGTGC CCAACTTAAC
CGCTTACAAC TTCGTCGTTC AAACAAAGTA ACAACCTTTA ATTACAAAGC ATTTTTGGAC
TCAGGGGATC AAACGTTACT TCCTTCTCTT CAATCATTAG ATACCCTGTT TATCCCAGCC
TCTCCAATGG TGGGCAATAT CGAACAAGAA TTTGACCCAT CTAAATTGTC TCAAGCGGGT
GATGCTGCTG ATGGTAAAAA AGCGATCAAA GTATTTGGCG AAGTAAATGC ACCGGGGACT
TTCTCTTACA AAGCAGGCAC AAACCTTGTC GATGTATTAA TGCGTGCTGG TGGCGTCACC
CGTTATGCAG GTGTAGAACA AATTCGAGTT ATTTCAAAAA ACAAACCTGC TCTGTTCAAT
CTAAAACGCT ATTTAGATAC TGGAGATGAC AGCTTATTGC CACCACTTGA AGTAGGTTCA
ACGATCTTTG TTCCTAAACA AGAAGAAGAA ATTAAATCAG GCTCAAACAT GGTCTATGTC
ATGGGTGAGG TAGCAAAACC GGGAGCGTTT GAGGGGAAAA AAGGCGCAAC GTTTATGGAT
ATCCTAGCAA ATGCCGGTGG CCCAACTCGA TTTGCAGAGT CTCGCCAAAT TCGTGTTATC
AAATCAAATG GCGTTGTGAT CAATTTTGAT TTATCAGGTT ATACCGAAGG CACCAACTAC
CAAAGACCCC CGCCGATTTC AGCCGGAGAT GCGATTTTTG TTCCTGAAAA AACAGACATG
AATGAAAAAT CATGGTTGAA AATAGCACCA AGTCGCGCAG TACGAGTATT AGGTGAAGTA
CAACACCCAG GACGTATCGA ATGGTCTGAT GAAATGTCAT TTTTGGATTT ATTGGCACAC
GTGGGTGGCC CTACTTTACG AGGCGACACC ACTCGAATTG AAATCGTCAC GCCCGACAGT
GATGGTAACA ACCAAGTGTA TACGTTTAAT TTAGATTCAT TTATCTCAAA AGGAAAACCT
GATTCTTCAT TACCAACCAT TCGAGCGGGA GCGACTATTC GAGTTCATGA TTTACCACAA
GATCCATCAG ACAACAAATC ACAATGGGTT CGTCAAAGTT CAGACAGCTC TATATACGTA
TTCGGTCAAG TAAATGCAGC CGGTCGTTAT CGCTTCACTA ATGAGATGCA CTTTTTAGAT
ATTCTATCCG CCGCAGATGG CCCAACGATG GATGCCGACA TTCATAACAT TCGTGTCACC
CATCGTGATA AAACGTACGC AAAAGTGAGT AAACTAAACT TAGCATTGTA TTTTGAAACC
GGTGATGAAT CCCTGCTTCC TATCGTAAAA ACGGGCGACA CCATCTACAT TCCAGAGAAA
AATAGAGCGT GGATAGATGA AAGTAAAGAA AGTACGATTC GAGTACTAGG AGCGATTAAT
AAACCCGGTC GTTACCGCTT TAATGACTCA ATGACCTTAT TAGATTTACT GGCCGAAGCG
GGTGGCCCAA GCGATGTCGC TTATCTTGAA AAAATCAGTG TCGTGAATCA CGCATTAGAT
AAAGGCCAAG CAAGAACCTT TGACCTTGTT GAATTTAGCC GAACGGCCAA TTTTAGAAGT
ATTCCCGTCC TAAGAGCCGG AGACACCATT TATATCCCGA ATAAAGACGA AAGCCTAATG
GAACAAGTGC GCGTTGGGAT TAAAGATGTT TTCCAAATCG TCGCTACGGT TGCCCTAATA
GGAGCCTTGT AA
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| Protein sequence | MRILHILLIT ILFSTVSMVH SKTVDDAVRV GDVITIMLPG EESLNKAFQV DKQGRVILPE
IGPLFVAGKT EAQMVSSVTL RLKTILQDLR NLQVFISKRQ LIINIQGYVK QPGEYTLSDG
DSVQLALYAA GGLRSGAQLN RLQLRRSNKV TTFNYKAFLD SGDQTLLPSL QSLDTLFIPA
SPMVGNIEQE FDPSKLSQAG DAADGKKAIK VFGEVNAPGT FSYKAGTNLV DVLMRAGGVT
RYAGVEQIRV ISKNKPALFN LKRYLDTGDD SLLPPLEVGS TIFVPKQEEE IKSGSNMVYV
MGEVAKPGAF EGKKGATFMD ILANAGGPTR FAESRQIRVI KSNGVVINFD LSGYTEGTNY
QRPPPISAGD AIFVPEKTDM NEKSWLKIAP SRAVRVLGEV QHPGRIEWSD EMSFLDLLAH
VGGPTLRGDT TRIEIVTPDS DGNNQVYTFN LDSFISKGKP DSSLPTIRAG ATIRVHDLPQ
DPSDNKSQWV RQSSDSSIYV FGQVNAAGRY RFTNEMHFLD ILSAADGPTM DADIHNIRVT
HRDKTYAKVS KLNLALYFET GDESLLPIVK TGDTIYIPEK NRAWIDESKE STIRVLGAIN
KPGRYRFNDS MTLLDLLAEA GGPSDVAYLE KISVVNHALD KGQARTFDLV EFSRTANFRS
IPVLRAGDTI YIPNKDESLM EQVRVGIKDV FQIVATVALI GAL
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