| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0307 |
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| Symbol | |
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| ID | 6962516 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | - |
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| Start bp | 342757 |
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| End bp | 345024 |
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| Gene Length | 2268 bp |
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| Protein Length | 755 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 643381608 |
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| Product | response regulator, histidine kinase |
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| Protein accession | YP_002264650 |
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| Protein GI | 209809112 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACATTTC GACTAAAAAC CATTATTGGT ATTTCGATTA TTCAGAGCGT CATGCTACTT
GTTCTTGTCC TTAGCTCAGT AAAATTCTTA TCTGACTCTA ATGAGCAACA ATTGGTGACC
CGCTCAAATG CAACATTAAC TATGTTTTCA AATGCCATAA AAGAGTCGCT AAATAACGGT
AATGACACCG AAACCACTAG CTTAATGCAC GATCTCATTG CTCTTGGGGA AATATGTTAC
GTTAAAATTT ATCGCCAAGA TGGTACTCTT ATTATTCAAG GCGGTCCAAA ATTACATGAA
ATACCAAACC CCAACAGCCC AATTTTAAAT AATGCCTCAG ATGGTAGCTA CGACATAGAA
TCCATCATTA GCAGTGACAC CAAACCCATT GGACGAGTTG AAATAGGGTT TGGTACCCAT
GGCATAAATT CCTTTTTCGC TCGAGCTAAA TCATGGATAT TTGCCATTGC CTTTATTGAG
CTTTTCATTG TCATCGGACT TTCCTATTTA CTGGGTAATA TGCTAACTAA AAACCTAAAC
AAACTAAAAA AAGCCGTGGA TAATGTTGCA AAACAAGGCC CAGGAGAGCA ATTAGAACTC
ACCTCAACAG GTGATTTAAA TGACGTAGCA AAAGCATTCA ACTCAATGTC ATACAACCTT
CAGAAAAACT ATCATGACCT AAAAGAAGCC CGCATTGAAG CTGAATCCGC GAATGAAAGC
AAAGGGCGAT TCTTAGCATC AATGAGTCAT GAGATACGAA CGCCAATGAA TGCAGTTCTT
GGGTTACTAG CCATATTAAA AGACAGCCAA TTGAAGCCAA AACAACGTGA TTTGGTTGAA
ACCGCGACAG ATTCAAGTGA ACTATTATTA TCAATCATCA ACGATATTTT GGATTGCTCT
CGCATGGAGG CAAATACCTT TGATCTCGAT AATAAAACCT TCAATATGCA TGCATGTTTA
CACCACGCTT TACATAGTTT CCAAGCTCAA GCAGATAAAA AAGAACTACA ATTAACGTTA
TCTCTTTCGG ATAACGTTCC TGAATACATA TGCGGTGACG TTAATCGATT TAGACAAATT
TTACTAAACC TGATTGGTAA CAGTTTAAAA TTCACAGATA ATGGGTTTAT TTTACTCTCT
TTAGATATCC AACCGGTAGA GGATAGATTC GCCTTAACCT GTATCGTTAA GGACTCTGGC
ATTGGTATAA AAGCAGAGCA ATTAGATTTA CTCTTTGAAG AATTCACAAT GGCAGATAAT
AGTTTTTCTC GCTCCCATGA AGGTTCAGGA TTAGGGTTAG CCATCACCAA ACGATTAATT
AACATGATGG ATGGTGCTAT TTCAGTAAAA AGTCAGTATG GAAAAGGCAG CGAATTTATG
TTTAACATTA TGCTTGATAG CGCATCAGAA GAAGACATTG AATCACTAAA ATCACCCAAA
GATAAAAACT CAACCATCTC CCCATGTATT TATTCCTCTG CACGATTATT GGTCGTTGAA
GATAATCTTG CCAACCAAAT CGTTATAAAA AATACCTTAA GCTATGCTGG TTATACAATA
GATATAGCCA ATAATGGGAA AGAAGCAATC TCAATGGTGA CAGATACCGA CTATGACTTG
ATCTTCATGG ATATTTCTAT GCCCGAAATG GACGGTATGA CGGCAACAAA AAAAATAAGA
ACCCTCTCGA AACATCACGA AAAAATGCCT ATTATAGCTT TAACTGCTCA CGCACTTTCA
GGAGACAAAG AACGATTCAT AGACGCAGGC ATGACTGATT ACCTTTCAAA GCCATTTAAT
CGAACGGCTT TGCTAGAATG CCTTGCGACT TATTTGTCGG TATCTTATGC TCAAGAAAAC
ACAATAAAAG GAAGTACTGT GGATAAAACT CAACATGATA TAAACAACAA TTTGCCACAA
CTTTTAGATG AGAGCATCAT TCAGCAAATT ATCCGTGATA CGGACGCAAG TGTCATGCCT
GAATTAATTC AATTTTATAT TATTGAGTCA AAAGAACGCG TCAATACCAT CGTAAAAACA
ATCACAACAA AAGACCTTTA CGCTCTCGAA TTTGAAGCTC ATACATTAGG AAGTAGTGCG
CTAACTCTCG GAAACGTTGC CTTATCTACG ATTTCACGTG AAATTGAACT ACATTGTATA
CAACAACAGT TTGATGAAGC CATTAAGAAA GCCACCCAAT TATCAGATAT TGCAATGCAA
TCATTCATTG CATTAGAAGA ACGAAATGCA CAAGGCTTCA CTAATTAA
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| Protein sequence | MTFRLKTIIG ISIIQSVMLL VLVLSSVKFL SDSNEQQLVT RSNATLTMFS NAIKESLNNG
NDTETTSLMH DLIALGEICY VKIYRQDGTL IIQGGPKLHE IPNPNSPILN NASDGSYDIE
SIISSDTKPI GRVEIGFGTH GINSFFARAK SWIFAIAFIE LFIVIGLSYL LGNMLTKNLN
KLKKAVDNVA KQGPGEQLEL TSTGDLNDVA KAFNSMSYNL QKNYHDLKEA RIEAESANES
KGRFLASMSH EIRTPMNAVL GLLAILKDSQ LKPKQRDLVE TATDSSELLL SIINDILDCS
RMEANTFDLD NKTFNMHACL HHALHSFQAQ ADKKELQLTL SLSDNVPEYI CGDVNRFRQI
LLNLIGNSLK FTDNGFILLS LDIQPVEDRF ALTCIVKDSG IGIKAEQLDL LFEEFTMADN
SFSRSHEGSG LGLAITKRLI NMMDGAISVK SQYGKGSEFM FNIMLDSASE EDIESLKSPK
DKNSTISPCI YSSARLLVVE DNLANQIVIK NTLSYAGYTI DIANNGKEAI SMVTDTDYDL
IFMDISMPEM DGMTATKKIR TLSKHHEKMP IIALTAHALS GDKERFIDAG MTDYLSKPFN
RTALLECLAT YLSVSYAQEN TIKGSTVDKT QHDINNNLPQ LLDESIIQQI IRDTDASVMP
ELIQFYIIES KERVNTIVKT ITTKDLYALE FEAHTLGSSA LTLGNVALST ISREIELHCI
QQQFDEAIKK ATQLSDIAMQ SFIALEERNA QGFTN
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