Gene VSAL_II0306 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_II0306 
SymbolluxO 
ID6961763 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011313 
Strand
Start bp341212 
End bp342717 
Gene Length1506 bp 
Protein Length501 aa 
Translation table11 
GC content42% 
IMG OID643381607 
Producttwo-component response regulator,transcriptional regulatory protein LuxO 
Protein accessionYP_002264649 
Protein GI209809111 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGCTTA TGCTACAAAA AGTATTATTA GTCGAAGACT CCACCTCTCT TGCCATCCTT 
TACAAACAAT ATGTAAAAGA TGAGCCGTAC GAGTTCTTCC ACGTAACCAC TGGAGAGCAA
GCCAAGGCTT TCATGGAAAA GAACCCACCA CACTTGGTGA TTCTTGATTT AAAACTGCCT
GATATGTCTG GTCAGGACGT ATTGGCTTGG ATGAAAGAAA AAAAACTCCC AACCGCCGTC
ATTGTTGCTA CCGCTCACGG AACCATCAAT ATTGCCGTCA ATTTACTTCA AAGTGGGGCC
GATGATTTCA TTGAAAAGCC CATTCAAGCC AATCGCCTAA AAACATCAAT CAGTAACCAC
CTAAAGCGCA ATAAGTTAGA AGGGCTAGTT GAAGACCTAC AAAACACCTT TAATCGTAAA
AAATACCAAG GGTTTATTGG CTCAAGCTTA CCAATGCAAG CGGTATACAA AATTATTGAT
GCCGTTGCCC CTACCACCGC CAGTGTATTC ATTTATGGTG AAAGTGGGAC AGGTAAAGAA
GTGTGTGCCG AAGCCATTCA TTATCAAAGT AAACGTAATA ACAAACCTTT TGTTGCCATT
AACTGTGGTG CAATCCCTCG AGACTTAATG GAAAGTGAAA TATTTGGTCA CGTAAAAGGC
GCGTTTACTG GTGCAACAAC CGATCGAAAA GGCGCGGCCA TGATGGCCAA TGGCGGCACG
CTATTTTTAG ATGAGTTGTG TGAAATGGAA TTAGAAATGC AGAAAAAATT GCTGCGTTTT
CTACAAACGG GTCGATTCAC GCCATTAGGT GGCAGTAAAG AACTGAGCAC AGATTTACGT
ATTATTTGTG CGACCAACCG AGATCCTCTA ACCGAAGTCA ACGAAGGTCG ATTCAGAGAA
GATTTATATT ATCGTGTTCA TGTGGTTCCT ATCGAAATGC CCCCACTTCG TGATCGCGGA
ACGGACATTA TTGATATCGC GGTTTTCTTC TTAAAAAAAT ACGCCAAAGA AGACAAAAAG
AAATTCATCG CAATGAAGCG AGACGTTGAA CTGCGCTTAT GTAATTACGC ATGGCCAGGC
AATGTCCGTC AATTACAAAA TATTATCCGT AATGTTGTGG TCTTACATAA CAGTACCCAT
GTTGTTCTTG ACCAATTACC ACCACCATTG AATCAAGCCA CTCAACCAAA AGTAAAACCA
GCGACTATTC AAAGTCATAT CGTAACAAAA GAAATCAATA ACGTGGCTCC AATAGCACCG
ATGTCAGTAG ACCCTCTTCA TACCGAAACG TCGGAACCAG ATAATTCATC AATGCAAACC
AATTCAGTAA CGTGGGATCA CAGCGCCATT CGTCCAATGG CCGACATTGA ACGTGAAGTG
ATTCAAAATG CCATTGATCA TTGTGACGGT AACGTCCTTA ATGCCGCCGT TCTTCTCGAA
CTAAGCCCAT CGACCCTATA TCGAAAAAAA CAAGCATGGG AAGCCGATGA AGAGACAGAG
AAGTAA
 
Protein sequence
MLLMLQKVLL VEDSTSLAIL YKQYVKDEPY EFFHVTTGEQ AKAFMEKNPP HLVILDLKLP 
DMSGQDVLAW MKEKKLPTAV IVATAHGTIN IAVNLLQSGA DDFIEKPIQA NRLKTSISNH
LKRNKLEGLV EDLQNTFNRK KYQGFIGSSL PMQAVYKIID AVAPTTASVF IYGESGTGKE
VCAEAIHYQS KRNNKPFVAI NCGAIPRDLM ESEIFGHVKG AFTGATTDRK GAAMMANGGT
LFLDELCEME LEMQKKLLRF LQTGRFTPLG GSKELSTDLR IICATNRDPL TEVNEGRFRE
DLYYRVHVVP IEMPPLRDRG TDIIDIAVFF LKKYAKEDKK KFIAMKRDVE LRLCNYAWPG
NVRQLQNIIR NVVVLHNSTH VVLDQLPPPL NQATQPKVKP ATIQSHIVTK EINNVAPIAP
MSVDPLHTET SEPDNSSMQT NSVTWDHSAI RPMADIEREV IQNAIDHCDG NVLNAAVLLE
LSPSTLYRKK QAWEADEETE K