Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_II0304 |
Symbol | |
ID | 6961761 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011313 |
Strand | - |
Start bp | 338736 |
End bp | 340016 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 643381605 |
Product | putative glycosyl transferase |
Protein accession | YP_002264647 |
Protein GI | 209809109 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAACCA AATCAAAAAC AACATTATTG TTTGTGCATT ATGGCGATGA TTGGATCAGA GGCAGTGAAA TCTGCTTGAT TAATCTCATC AAAAGCATTA ATCATCAAAA ATTTGAGTGC ATCCTTTGGT GTAACCAACA GCGCCTTGCC GATGAAGTAA ACAAGCAAGT CAGCGCCGTT TATGTCACCC CCTTCACTTT ATTATTAGGG TGGAAAGCAC CTAAATTCTC ATTATCTAAT TGGTATCAGC TATACCAACA AGGTAAAGAG ATTGTGGATA CTCATCAGGT TGACTTAATT CACTGTAACA GTGCCGCACC ATGTCAGTGG ATGAACCCAG TGGCACGCCA CACTCATACG CCTTTAATTA CTCACTTACA CACCCAATAC CCACTTCGTG ACCGCTTAAC CTTAGGCATT CATTTTAGCC CTAGCCTTAT TACGGTAAGT AACGCGATAG GTGAAGAATT GCTTCATGAT GGATACAACC GAAAAAACCT AACCGTTATC CCTAATAGTA TTGATACTAC AAAATTAAAT GCTCAACGCA CGACCCCATT ACGTCAACAA CTGGGAATAG ACAGTAGCGC CTTTGTTTTG GCAACATCAG GATCATTAAT TCATAGAAAA GGCGTTGATC TAATTATTGA TAGCTTGCAT AAATTGGATG CTGTCATGCT TAACATTCAT TTGATTGTTA TCGGCGAAGG AGAAGAACGA GCACAATTAG AGCAACAAGC AAACCACCTT CAACTCCATA ATAACATTCA TTTTTTAGGC GAACGAGACA ACGTTGTTGG TCTTCTAAAA AGTGGCATGA ATGCTTATAT TAGTGGCGCA AGAGACGAAG CATTTGGCCT TGCTCTTATT GAAGCCTCTT TAGCCAAGTT ACCGGTCATT GCTCCAATGG TTGGAGGCAT TCCAGAAGTG ATTTCCCATT ATGAAACCGG GTTTCTCACT CAACCAAACG ACAGTGAATC ATTTGCAAAA GCGATCATGG TTTTTATTCA AAACCCACGT TTAACAAAAG AGATGGGAGT CAAAGGAAAA GAAATTGTAT ATCGAAACTT CACTTTGCCT GAATACGCAA AACAATTTGA AAAACACTAC GAACAACAAC TAAACACCTC AAATGAAGAG ACTTATTCTC GACCATTATG GGCCGCAATT ACGCCTATTT TCAGTCGTCT TCGTTATATG TCCACGCTGT TTTTTCATCA TCATATTGTC TCTAGCTTCG GTGTAAATGA AACCCTAAGT AAGGAGACTC ATCATGAATA A
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Protein sequence | MSTKSKTTLL FVHYGDDWIR GSEICLINLI KSINHQKFEC ILWCNQQRLA DEVNKQVSAV YVTPFTLLLG WKAPKFSLSN WYQLYQQGKE IVDTHQVDLI HCNSAAPCQW MNPVARHTHT PLITHLHTQY PLRDRLTLGI HFSPSLITVS NAIGEELLHD GYNRKNLTVI PNSIDTTKLN AQRTTPLRQQ LGIDSSAFVL ATSGSLIHRK GVDLIIDSLH KLDAVMLNIH LIVIGEGEER AQLEQQANHL QLHNNIHFLG ERDNVVGLLK SGMNAYISGA RDEAFGLALI EASLAKLPVI APMVGGIPEV ISHYETGFLT QPNDSESFAK AIMVFIQNPR LTKEMGVKGK EIVYRNFTLP EYAKQFEKHY EQQLNTSNEE TYSRPLWAAI TPIFSRLRYM STLFFHHHIV SSFGVNETLS KETHHE
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