Gene VSAL_II0297 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_II0297 
Symbol 
ID6961754 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011313 
Strand
Start bp329989 
End bp331077 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content40% 
IMG OID643381598 
Productputative glycosyl transferase 
Protein accessionYP_002264640 
Protein GI209809102 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACTA TCATTCATGT TGTTCAACAT CTTTCCCCTG GCGGCCTAGA AACTATGGTG 
CTAGATATGT TGGCTTTTAC CAATCCCGAG CATAAAATCG TATTAGTCAG TTTAGAAGGC
ACACTCACAG AGTCTATTCA ACGTTGGCCA CGACTGTCAC ACTATCAAGA ACAGCTTATT
TTTCTTGATA AACCCAGTGG TTTTCAAACA AGTACCATTA AGAAATTGAT TTCAATATTC
AAAGAGCATC AAGCAAATAT CGTGCATTCA CACCATATCG GCCCACTCTT ATACGCTGGC
TGTGCCGTAA AATGGTATGG CAAAGCCGAA CATATTCATA CTGAACATGA TGCATGGCAC
CTTAATAATA AAAAGCATCG TTATTTACAA CGTCTTGCTC TTTCTATTTC AGAACCAAAA
CTCGTTGCTG ATGCACATTT TGTGAAAAAA ACATTGTCCC TAATTTTTAA TAAGTACCCT
ATTTACACCA TTAAAAATGG CATCGATACG TCGAAGTTTC AATCAGGTCA TCGACAAAAT
GCGCATCAAA CCTTGCGTCT AAACTTACCA GAAGAAAGCA TTATTATTGG TAATGCCGCA
CGGCTTGAAA TGGTAAAAGG CCAAGACAAA CTGATCGAAG CGTTTCGCTT TCTTGATTCA
AAATATCATT TGTTATTGGC AGGGTCGGGG TCAGAAAAAG AATACCTGCA ACGACTTGTT
GCCGAATATC ATCTTGAGAA ACGAGTGCAC TTTCTTGGGC ATATCGACCA TATGCCGACG
TTTTATCAAG CACTTGATGT ATTTTGCTTG CCATCAAACA ACGAAGGCTT TCCACTTTCA
ACCTTAGAGG CTCAATCATG CGGTGTTCCT TGTATTGCCA ATGATGTCGG TGGTGTGAGT
GAAACCTTGT GCCCAACGTA CAGTTTATTA GTCGCCAATA ATGATGCCAT TACCTTAGCG
CAAGGAATAC AGGCGCTCGC TTATCAAAAA GAAACCGGCT CTCCTCGTGA TTTCATACTA
AAAAACAATC ATGCAGGCAG TATGGCAACA GCGTATGAAA ACCTTTACTT TCAAGGAGTA
ACGATATGA
 
Protein sequence
MKTIIHVVQH LSPGGLETMV LDMLAFTNPE HKIVLVSLEG TLTESIQRWP RLSHYQEQLI 
FLDKPSGFQT STIKKLISIF KEHQANIVHS HHIGPLLYAG CAVKWYGKAE HIHTEHDAWH
LNNKKHRYLQ RLALSISEPK LVADAHFVKK TLSLIFNKYP IYTIKNGIDT SKFQSGHRQN
AHQTLRLNLP EESIIIGNAA RLEMVKGQDK LIEAFRFLDS KYHLLLAGSG SEKEYLQRLV
AEYHLEKRVH FLGHIDHMPT FYQALDVFCL PSNNEGFPLS TLEAQSCGVP CIANDVGGVS
ETLCPTYSLL VANNDAITLA QGIQALAYQK ETGSPRDFIL KNNHAGSMAT AYENLYFQGV
TI