Gene VSAL_II0295 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_II0295 
Symbol 
ID6961752 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011313 
Strand- 
Start bp328146 
End bp328790 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content39% 
IMG OID643381596 
Productsugar transferase 
Protein accessionYP_002264638 
Protein GI209809100 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2148] Sugar transferases involved in lipopolysaccharide synthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.199839 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAAATT CATATTACAC AATTAACCAA CCAACCATTA AAGCAAAACG GGCTTTTGAC 
GTATGCCTAT CTCTTATTGG TTTGCTCATT ACTTTGCCTT TATTTCCATT GATTGCCATT 
GCCATTAAGG TTAACTCTAA AGGCCCTGTA TTTTATCGCC AACTTCGCGT GGGAAAGGCA 
ATGCCAGAAC AAATTTACGT ATTTGAAATG ATAAAATTTA GAAGTATGGT AGAAGATGCG 
GAAGTGAGCA CTGGCGCAAC ATTAGCCGTG AAAGGAGACA CTCGCGTGAC GCTCGTTGGA 
CGATTTTTGC GAAAAACACG TCTTGATGAG TTACCTCAAT TTTTTAATGT TTTAAATGGT 
GATATGTCTC TTGTTGGACC AAGACCTGAG CGACCAACCT TCTATAATAA ACTAGAACAT 
GAGATCCCTT ATTTTAGTGA ACGAACCTAT GGCGTTCTAC CTGGCATTAC TGGTTTAGCG 
CAAGTAAACC AAGGTTATGA CACCAGTATT GAAGACGTAC GATCTAAGGT TGGGTTTGAC 
CACAGTTACG CACTGTCACT CCGTTCTATC TCAAGCTGGA TAAAATCAGA CAGTTACATT 
CTTCTTATGA CTATAAAAGT CATGTTATTT GCTAGAGGCC AATAA
 
Protein sequence
MINSYYTINQ PTIKAKRAFD VCLSLIGLLI TLPLFPLIAI AIKVNSKGPV FYRQLRVGKA 
MPEQIYVFEM IKFRSMVEDA EVSTGATLAV KGDTRVTLVG RFLRKTRLDE LPQFFNVLNG 
DMSLVGPRPE RPTFYNKLEH EIPYFSERTY GVLPGITGLA QVNQGYDTSI EDVRSKVGFD 
HSYALSLRSI SSWIKSDSYI LLMTIKVMLF ARGQ