Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_II0293 |
Symbol | |
ID | 6961750 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011313 |
Strand | - |
Start bp | 325392 |
End bp | 325940 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 643381594 |
Product | hypothetical protein |
Protein accession | YP_002264636 |
Protein GI | 209809098 |
COG category | [S] Function unknown |
COG ID | [COG3310] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.354287 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATATTC AAAAAATAGA ACAAGAAGTA CAACAATGGT TAGAAGATGT CGTTATCGGC CTAAATCTTT GCCCTTTTGC CGCGAAACCA AATCGCAATA AACAAATCAA AATCTTTGTT TCTGAAGCGA CAACGGAAGA AGTTTTGCTT GAAGACGTAC TTCAAGAGTT AATGAATTTA AATTCTAAAA CAGCAGAAGA GCTAGAGACC ACCTTAGTTG CTATTCCAAA CATGCTGCAA GATTTCATGG ATTACAATTT CTTCTTAGAT TGGGTTGATG CGCTACTCAA ACAACAAGAC TGGGAAGGCA CTTATCAAAT TGCGACTTTC CATCCTGATT ATTGCTTTGG CGGTGCTGCA CCAGAAGATG ATGAGAATTT AACGAACCGT TCTCCTTATC CTGTCCTTCA TCTTATTCGT GAAGAAAGCA TGGAAAAAGT GTTAAAACAC TATCCAAATC CTGAAGCTAT CCCAGACACA AACATTGCTC GTGTTGAGGC TCTTAGCCCT GAAGAGCGTC GTAAGTTATT CCCTTACTTG TTTGTATAA
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Protein sequence | MNIQKIEQEV QQWLEDVVIG LNLCPFAAKP NRNKQIKIFV SEATTEEVLL EDVLQELMNL NSKTAEELET TLVAIPNMLQ DFMDYNFFLD WVDALLKQQD WEGTYQIATF HPDYCFGGAA PEDDENLTNR SPYPVLHLIR EESMEKVLKH YPNPEAIPDT NIARVEALSP EERRKLFPYL FV
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