| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0287 |
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| Symbol | |
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| ID | 6961744 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | + |
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| Start bp | 319054 |
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| End bp | 321501 |
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| Gene Length | 2448 bp |
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| Protein Length | 815 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 643381588 |
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| Product | predicted permease |
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| Protein accession | YP_002264630 |
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| Protein GI | 209809092 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3127] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGAATAA ATCAAGCGTC GCAGCAAGGA AAAAAATCAG GCAATAAAAT GGTGTTACGC
TGGAGTTGGC GTGAGATATG GCAAGGTCAG TTATGGCCGG TGATGGCGGT GTTAACCTTA
ATTGTGGCGT GTGTGGTTGC CTTGTCAGCC TTGGCTATTC GTGTCGAAAA AGTCATGACA
GAACAAGGTC GTTCTATGAT GGCGGCTGAT TTAGTATTCA GCTCGGCTAA CCCAACCCCC
GAATTTATTT TGCAACAAGC GCATGACCAA CATTTAGTTT TATCTTCTCA AGTGCGCTTT
CAAACCATGG CATTCAGTGA TACAGGAATG CAATTGGTCA GTGTAAAGGC CGTTGAAAGT
AATTACCCAC TTCGCGGTGA GCTTTTATTA AAGGGAGACA ATCACCAAAC GCACACAAAG
GTACAACCCG GCGAGGTATG GATAGCGGAT CGTCTGTTGT CATTGTTGGA TCTAAAAATT
GGAGACGTGA TTGCTGTTGG GGATGCAGAA TTGCCGATAA GTGGCGTGAT TGAATCTGAA
CCTGAGTTAG CGTTTAACCC ATTCAGAACC ATGCCAAGTG TGTTTATTCA TCAATCTGAT
TTAGACAAAA CCGGCGCGAT TCAACTTGGG AGTCGTGTGA AATATCGAAC GCTATTTAAA
GGGGACGACA GTGCGATTTC TTTATTGCAA AGTGATTATG AATTAGAGGC AGGAGAACGG
TGGATAAGTG AAGAAACTCA AGGTCGAACC GCCGATTTAA TGCAAAAAGC CAAGCAGTAT
TTATCGCTGA CTATCTTGAT GGTGATATTA ATGGCATCGG TCACTTTGGT GTTAACGTGT
CAGCATTACG CGACCAGTCG TGCCAATACC GTTGCCATGT TAAAAAGCAT GGGCGCAAGT
AAACAATGGT TGAAACGTTG GTTGCTAAGC CAAGTGGGGT TGATGTTCTT TACTGGTGTG
GTGGCTGGCT CATTAATTGG TCTTGGCTTA GAATTATTAT TACGTATTCC ATTGACGGGG
ATCTTACCTG AGAACCTACC AAGCTACGGT TGGCAACCAT TTGTATTTGG CTCTGTGGTC
GCGTTATTTA TTGGTTTACC TGCATTGGGT ATCCCTTTAT TACGTTTATT AGATACCCCT
GCGATTGCGG TTCTTCAATC TCAAACAACC AATCGTTCTA AAAAGGGTTT ATGGCTTGTT
GCTGTTCCAA TCGTTGCCTT TTTATTGATG TATGGCACTA ACCGTTTAGT CTGGATGGTC
TCTGTCGGTT TAGTGGTGTT GTTTATCTTA CTTGCTGGCA TTAGCTATGG TTTAGTGTAT
TTATTTGGTC GCTTTAAGTG GGGCCCTGCC ATGACATTGG CGCTTAGTCG TATTAAGCGT
TCGCCAAAAA ATAGCATGAT GCAATTGGCT GCGTTGTCTG GCTCGTTGAT GCTAGTTGCG
GTGATTTGGT TAGTAAGAAC CGATTTATTG GGTGACTGGC AACAAACGCT TCCGCCAGAT
GCGCCAAACG TATTTGCGAT GAACATTGCG CCTTATGAAC AACAAGAGTA TTTGCAAAAA
TTAGATAATG AAAAGTTAGA TCGCTCAGAA GGCTACCCAA TTGTTCGTGG TCGTCTTACT
GACATTAACG GCGAAAGTAC CAAAGAGAAA ATGAAAGGGG AAGGGCAAGG CTCTGAAGCA
TTACGACGTG AGATAAACTT TACGTGGCGT GATGCGTTAC CCATTCATAA TGAAGTGACA
GCGGGAGAAT GGACGAGTTC TAATGGGGTT TCTGTAGAGC AAGATGTTGC CAATGACTTG
AATATTCAAA TTGGAGATAC GTTAAGTTTC TCAGTGAATA GTCAGCCTTT CTCTGCGGTG
GTTAATTCAA TTCGAGTGGT GGATTGGCAG AGCATGAAAC CGAACTTCTA TTTTATCTTC
ACGCCGGATG TGATTGCCGA TTTACCAGCC ACTTGGTTGG TGAGCTTTAA AGTAGATGAC
AATGAAAATA CGTTATTGAA TCAACTGGCT CGTGATTACC CAACCGTGAG TTTATTGGAT
TTTAGAACCA TGGGTGGAAA GATCCAAGCC ATGCTCGCGC AAATTACGTG GTCGTTAAGT
GTATTAGCCG GTTTAGGTGT GGTGAGTGGC GTGTTATTGA TATTCACTTT GCTTCGTTTG
AGTTTGTATC AGCGCCAACG TGAAATCACC CTTTATCGAA CGCTTGGGGC AAGCCGTCAG
CGCATTAGTC AGACGTTATG GAGTGAATAC GGCGTAATGG CATTAGCCGC AGGTTTTGTT
GCTGTGATGG GTGCTGAGGC GATTGTCTTT AGCTTAGTGA AGTGGGGCTT TAAACTGGAG
CCAACATTGC ACATAGGCAT GTGGATTGTG CTGCCATTAC TCGCCATGAT GATTGTATTT
ATGAGTTTGG CTAGTGTGAT TAAGCAGTTA TTGAAGCCGT TAAAGTAA
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| Protein sequence | MGINQASQQG KKSGNKMVLR WSWREIWQGQ LWPVMAVLTL IVACVVALSA LAIRVEKVMT
EQGRSMMAAD LVFSSANPTP EFILQQAHDQ HLVLSSQVRF QTMAFSDTGM QLVSVKAVES
NYPLRGELLL KGDNHQTHTK VQPGEVWIAD RLLSLLDLKI GDVIAVGDAE LPISGVIESE
PELAFNPFRT MPSVFIHQSD LDKTGAIQLG SRVKYRTLFK GDDSAISLLQ SDYELEAGER
WISEETQGRT ADLMQKAKQY LSLTILMVIL MASVTLVLTC QHYATSRANT VAMLKSMGAS
KQWLKRWLLS QVGLMFFTGV VAGSLIGLGL ELLLRIPLTG ILPENLPSYG WQPFVFGSVV
ALFIGLPALG IPLLRLLDTP AIAVLQSQTT NRSKKGLWLV AVPIVAFLLM YGTNRLVWMV
SVGLVVLFIL LAGISYGLVY LFGRFKWGPA MTLALSRIKR SPKNSMMQLA ALSGSLMLVA
VIWLVRTDLL GDWQQTLPPD APNVFAMNIA PYEQQEYLQK LDNEKLDRSE GYPIVRGRLT
DINGESTKEK MKGEGQGSEA LRREINFTWR DALPIHNEVT AGEWTSSNGV SVEQDVANDL
NIQIGDTLSF SVNSQPFSAV VNSIRVVDWQ SMKPNFYFIF TPDVIADLPA TWLVSFKVDD
NENTLLNQLA RDYPTVSLLD FRTMGGKIQA MLAQITWSLS VLAGLGVVSG VLLIFTLLRL
SLYQRQREIT LYRTLGASRQ RISQTLWSEY GVMALAAGFV AVMGAEAIVF SLVKWGFKLE
PTLHIGMWIV LPLLAMMIVF MSLASVIKQL LKPLK
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