Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_II0280 |
Symbol | |
ID | 6962500 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011313 |
Strand | + |
Start bp | 311818 |
End bp | 312741 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 643381582 |
Product | integral membrane protein |
Protein accession | YP_002264624 |
Protein GI | 209809086 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCATATG ACACGTTAAT AACCATTGGT GTACTGGTTT TTGTAGTTCT GGTATTAATC GCACTTGGTG TAAAAACCGT ACCTCAAGGC CACAATTGGA CAGTAGAGCG ATTTGGTCGA TACACGCAAA CATTACAACC GGGCCTAAAT TTAATCATCC CATTTATTGA TAACGTTGGG CAACGAATCA ATATGATGGA GCAAGTTCTT GATATTCCAG CTCAAGAAGT GATCTCAAAA GACAATGCAA ACGTTACTAT TGATGCGGTG TGTTTTGTTC AAGTCGTCGA TGCAGCAAAA GCGGCTTATG AAGTGAGCGA TTTGCAACAC GCAATTCGTA ATCTAACATT AACCAATATG CGTACTGTTC TAGGTTCGAT GGAATTAGAT GAAATGCTAA GCCAACGAGA CATGATTAAC GTGAAACTAT TAGCCATTGT TGATGCAGCA ACAAACCCTT GGGGTGTCAA AGTTACTCGT ATCGAAATTA AAGATGTTCA GCCACCAGCG GATCTTACGG CGGCAATGAA TGCACAAATG AAGGCCGAGC GTCATAAGCG TGCCGATGTA CTAGAAGCTG AAGGTAAACG TCAAGCCGAG ATTTTAAAAG CAGAAGGACA CAAGCAAGGT GAGATCTTAA AAGCCGAAGG TGACAAACAA GCCGCTATTC TACAAGCCGA AGCGCGTGAG CGTGCAGCAG AAGCCGAAGC TAATGCAACA AGAATGGTAT CAGAGGCAAT TTCTCAAGGT GATATGCAAG CTGTGAATTA CTTCATTGCT CAAGGATACA CCGAGGCGCT AAAATCAATA GGGCAAGCTG AGAACAGTAA GATCATTATG CTGCCTTTAG AGGCGTCAGG TTTAATGGGC TCAATTGCGG GTATTGCTGA GATGTTTAAA GTGGACAAAG AGGGTCCTAA ATAG
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Protein sequence | MAYDTLITIG VLVFVVLVLI ALGVKTVPQG HNWTVERFGR YTQTLQPGLN LIIPFIDNVG QRINMMEQVL DIPAQEVISK DNANVTIDAV CFVQVVDAAK AAYEVSDLQH AIRNLTLTNM RTVLGSMELD EMLSQRDMIN VKLLAIVDAA TNPWGVKVTR IEIKDVQPPA DLTAAMNAQM KAERHKRADV LEAEGKRQAE ILKAEGHKQG EILKAEGDKQ AAILQAEARE RAAEAEANAT RMVSEAISQG DMQAVNYFIA QGYTEALKSI GQAENSKIIM LPLEASGLMG SIAGIAEMFK VDKEGPK
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