Gene VSAL_II0280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_II0280 
Symbol 
ID6962500 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011313 
Strand
Start bp311818 
End bp312741 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content43% 
IMG OID643381582 
Productintegral membrane protein 
Protein accessionYP_002264624 
Protein GI209809086 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0330] Membrane protease subunits, stomatin/prohibitin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCATATG ACACGTTAAT AACCATTGGT GTACTGGTTT TTGTAGTTCT GGTATTAATC 
GCACTTGGTG TAAAAACCGT ACCTCAAGGC CACAATTGGA CAGTAGAGCG ATTTGGTCGA
TACACGCAAA CATTACAACC GGGCCTAAAT TTAATCATCC CATTTATTGA TAACGTTGGG
CAACGAATCA ATATGATGGA GCAAGTTCTT GATATTCCAG CTCAAGAAGT GATCTCAAAA
GACAATGCAA ACGTTACTAT TGATGCGGTG TGTTTTGTTC AAGTCGTCGA TGCAGCAAAA
GCGGCTTATG AAGTGAGCGA TTTGCAACAC GCAATTCGTA ATCTAACATT AACCAATATG
CGTACTGTTC TAGGTTCGAT GGAATTAGAT GAAATGCTAA GCCAACGAGA CATGATTAAC
GTGAAACTAT TAGCCATTGT TGATGCAGCA ACAAACCCTT GGGGTGTCAA AGTTACTCGT
ATCGAAATTA AAGATGTTCA GCCACCAGCG GATCTTACGG CGGCAATGAA TGCACAAATG
AAGGCCGAGC GTCATAAGCG TGCCGATGTA CTAGAAGCTG AAGGTAAACG TCAAGCCGAG
ATTTTAAAAG CAGAAGGACA CAAGCAAGGT GAGATCTTAA AAGCCGAAGG TGACAAACAA
GCCGCTATTC TACAAGCCGA AGCGCGTGAG CGTGCAGCAG AAGCCGAAGC TAATGCAACA
AGAATGGTAT CAGAGGCAAT TTCTCAAGGT GATATGCAAG CTGTGAATTA CTTCATTGCT
CAAGGATACA CCGAGGCGCT AAAATCAATA GGGCAAGCTG AGAACAGTAA GATCATTATG
CTGCCTTTAG AGGCGTCAGG TTTAATGGGC TCAATTGCGG GTATTGCTGA GATGTTTAAA
GTGGACAAAG AGGGTCCTAA ATAG
 
Protein sequence
MAYDTLITIG VLVFVVLVLI ALGVKTVPQG HNWTVERFGR YTQTLQPGLN LIIPFIDNVG 
QRINMMEQVL DIPAQEVISK DNANVTIDAV CFVQVVDAAK AAYEVSDLQH AIRNLTLTNM
RTVLGSMELD EMLSQRDMIN VKLLAIVDAA TNPWGVKVTR IEIKDVQPPA DLTAAMNAQM
KAERHKRADV LEAEGKRQAE ILKAEGHKQG EILKAEGDKQ AAILQAEARE RAAEAEANAT
RMVSEAISQG DMQAVNYFIA QGYTEALKSI GQAENSKIIM LPLEASGLMG SIAGIAEMFK
VDKEGPK