Gene VSAL_II0240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_II0240 
Symbol 
ID6961704 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011313 
Strand+ 
Start bp263816 
End bp264478 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content40% 
IMG OID643381548 
Productmembrane protein 
Protein accessionYP_002264590 
Protein GI209809052 
COG category[S] Function unknown 
COG ID[COG3619] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATTTCAA AACTACCAAA ATGGGTTGAA TACGGTACCT TTTTTCTGGC CTTACTCGCT 
GGTATTACTA ACTCTGTCGG TTTGTTGGGC TTCCAGCATC AATCTATTTC TCATTTATCT 
GGTACTGCAA CGCTATTAGG TACTCAGTTG CTGGCGTTTG ATGGTACGAC CTTACATTTA 
TTTTATATCA TTGTTAGTTT CGTTTTAGGT TCTTCGTTAA GCAGTTTAAT CGTAGGGTGC 
AGTGCTTTAA AATTAGGGCG CAGATATAAT TTTGCCTTAT TAATAGAAAG TTTATTTTTG 
TTTGCTGCAA TGGTTATTTT AAACGAAGGA AGCCAATGGG GGCATTATTT TGCTTCGGCG 
GCTTGTGGTT TGCAGAATGG ATTGGTGACG ACATACAGCG GGGCAGTCGT TAGGACGACT 
CATGTTACGG GAGTCTTTAC TGATTTAGGC ATCATGTTAG GGATGAAACT TAAAGGCGAG 
GTGATTCATC GCAGACGGTT AGCCTTGTAT CTGTTTATCG CATTTGGTTT TATTTTCGGT 
GGTGTTATTG GCGGGTATTT TTATCCAATC CTTGGAATCA ATACGTTAGC GATCCCTGCG 
ACATTGTGTG CGTTATTGGC GTTATCTTAC TCATTGTATT TATTTCAACA TCCTGACCAT 
TAA
 
Protein sequence
MISKLPKWVE YGTFFLALLA GITNSVGLLG FQHQSISHLS GTATLLGTQL LAFDGTTLHL 
FYIIVSFVLG SSLSSLIVGC SALKLGRRYN FALLIESLFL FAAMVILNEG SQWGHYFASA 
ACGLQNGLVT TYSGAVVRTT HVTGVFTDLG IMLGMKLKGE VIHRRRLALY LFIAFGFIFG 
GVIGGYFYPI LGINTLAIPA TLCALLALSY SLYLFQHPDH