| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0239 |
|---|
| Symbol | glgA |
|---|
| ID | 6961703 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aliivibrio salmonicida LFI1238 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011313 |
|---|
| Strand | + |
|---|
| Start bp | 262243 |
|---|
| End bp | 263691 |
|---|
| Gene Length | 1449 bp |
|---|
| Protein Length | 482 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 643381547 |
|---|
| Product | glycogen synthase |
|---|
| Protein accession | YP_002264589 |
|---|
| Protein GI | 209809051 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0297] Glycogen synthase |
|---|
| TIGRFAM ID | [TIGR02095] glycogen/starch synthases, ADP-glucose type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGCTACTA AAACGCTTTC GATTTTATTT GCTGCATCTG AAGTCGAAGG ATTGATCAAA
AGTGGGGGCT TGGCAGATGT TGCCAAGGCT CTGCCTAAAT CATTAAAAGA CTTAGGTCAT
GAAATACATA TTGCTATGCC TGCTTATAGT GCAATCCCAG AGCGTGATGA TGCTGAAGTA
TTGTTGAGCT CGACATTAGA ACATTGGCCT CATACACCAT ACCAAGTGAG ATCATTGAGT
GTTGAAGGGA TCACGGTATT AGGCATCGAA TGTGCTGATT ATTTTGATCG TGCAGAAATG
TATGCTGAAA ACAATCAAGC TTATGCTGAT AATGGTGAGC GTTTTGCTTT TTTTAGTGCC
GCTTGTTTAG ACATGCTACC TAAATTAAAG ATTAAACCCG ATGTTATTCA TGCCAATGAT
TGGCATACTG GCTTATTGCC GTACCTTCTT AAAAAACGCT ATGCAAACGA CGCTTACTTT
TCTCAAGTAC GCAGTGTTTT ATCTGTTCAT AATGCGGTGT TTAAAGGTAT TTTTCATTAC
GATGATATTG GATGCCTTTC TGAATTTAAA ACGCATTATG TGCCTGAAGC GGCCGTTAGT
CATACTCATA TTAGTATGCT CAAAGCGGGT GTTCAATGTG CAGATAAGAT TAATGCGGTA
AGTCCAACGT ATGCAAAAGA GTTGCTGACA GAACTGGGTT CTCATGGAAT GGCTTCTGAT
TTCCAAGCAA GAGAACCTGA CTTGTTTGGT ATTTTGAATG GTTGTGATTA TAGTGAGTGG
AGTCCGGAGA CGGATACTTT CATTCCTAAG CAATTTAAAG CCAATCGAAT TAGTATGGTT
CGTGGTAAGA AAGTATGTAA AGCAGCTCTG CAAGAAGAAG TCGGTTTACC ACAAAAAGAA
GTGGCAATGT ATGGCATGGT TTGTCGTTTA ACAAACCAGA AAGGCATTCA TTATTTACTT
CCAATTTTAG AGCAGTTTTT AAAGCATGAT TTGCAAATTG TTATTGTTGG TACGGGTGAT
CCTGTTCTTG CTGCACAATT AACAGAAATT GCAGCGATAC ATTCTGATAA GTTTGCGTTT
GTCGAAGCAT ACAGCAATAA GCTAGCTCAT TGGATAGAAG CCTCATCTGA CTTTTTCTTA
ATGCCATCAG AATTTGAACC TTGTGGTTTA AATCAGATAT ACAGTATGTC ATATGGAGCC
TTGCCGATCG TTCGTGCGGT TGGTGGGTTA AAAGACAGTG TGATTGATTA TGATAGTGAC
AATGAAAATG CGACGGGTTT TAGTTTTATT AACCCTGAGC CAACAGAGTT GCTATTAGTA
TTAATGCGTT CGTTGTTATT GTATGCCCAA GATTTGAATG AAGTTAAACG AATTCAACTA
CATGCAATGA AACAAAACTT TAGCTGGTCT GATGCCGCAG AGAAATATGT TGAAATGTAT
CTAGATTAA
|
|---|
| Protein sequence | MATKTLSILF AASEVEGLIK SGGLADVAKA LPKSLKDLGH EIHIAMPAYS AIPERDDAEV
LLSSTLEHWP HTPYQVRSLS VEGITVLGIE CADYFDRAEM YAENNQAYAD NGERFAFFSA
ACLDMLPKLK IKPDVIHAND WHTGLLPYLL KKRYANDAYF SQVRSVLSVH NAVFKGIFHY
DDIGCLSEFK THYVPEAAVS HTHISMLKAG VQCADKINAV SPTYAKELLT ELGSHGMASD
FQAREPDLFG ILNGCDYSEW SPETDTFIPK QFKANRISMV RGKKVCKAAL QEEVGLPQKE
VAMYGMVCRL TNQKGIHYLL PILEQFLKHD LQIVIVGTGD PVLAAQLTEI AAIHSDKFAF
VEAYSNKLAH WIEASSDFFL MPSEFEPCGL NQIYSMSYGA LPIVRAVGGL KDSVIDYDSD
NENATGFSFI NPEPTELLLV LMRSLLLYAQ DLNEVKRIQL HAMKQNFSWS DAAEKYVEMY
LD
|
|---|
| |