Gene VSAL_II0224 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_II0224 
Symbol 
ID6961691 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011313 
Strand+ 
Start bp248032 
End bp248610 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content40% 
IMG OID643381534 
Producttranscriptional regulator, TetR-family 
Protein accessionYP_002264576 
Protein GI209809038 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAAAT CAGCCAAATT TAACAGAGAT GATGTGATTG AAAAAGCCAC CAATCTTTAT 
TGGGAAAAAG GCTTTCACGC CACATCAATG CGTAATCTTC AAGACGTGAT TGATATGCGC 
CCTGGCAGTA TTTACGCGAC ATTTGGCAGT AAAGAAGGGC TATTCAAAGA AGTATTAAAC 
AAATACACCG AAATGGGTGT TGCCCACATT GCTGAATGCA AAGCGAATAC GACATCGCCT 
TTGTCTGCTT TAAAAGAGTT TGTCACGTTG AATATTATTG GCAATAAAGG GCCACTACCA 
AGCCGTATGT GTATGCTGGC AAAAACGATT GCAGAATTAA CGGAAGAAAA CGCAGAATTG 
CTCGCTGAAG CAAAGAAAAT GCTCGTTATC ATGGAAGGTC AATTTATTAC TTTGTTAGAA 
GAAGCACAGC AGCAAGGTGA GTTAAGCAAA GACAAAGATG TGGCTCAATT GGCACGTTTT 
GTTCAAGTAC AAATTATGGG ATTAAGAGCT TATGCTTGTG CAAGTAATGG CGATGCACCT 
TTAGAGAAAA TGATTGATGA TATGTTTGTG TCACTCTAA
 
Protein sequence
MAKSAKFNRD DVIEKATNLY WEKGFHATSM RNLQDVIDMR PGSIYATFGS KEGLFKEVLN 
KYTEMGVAHI AECKANTTSP LSALKEFVTL NIIGNKGPLP SRMCMLAKTI AELTEENAEL 
LAEAKKMLVI MEGQFITLLE EAQQQGELSK DKDVAQLARF VQVQIMGLRA YACASNGDAP 
LEKMIDDMFV SL