| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0222 |
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| Symbol | |
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| ID | 6961689 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | + |
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| Start bp | 246909 |
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| End bp | 247592 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 643381532 |
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| Product | exonuclease |
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| Protein accession | YP_002264574 |
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| Protein GI | 209809036 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2176] DNA polymerase III, alpha subunit (gram-positive type) |
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| TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGTATCAT TGCCGACTAA TTATATGACT TGGAAATATT TCGTGCCTTT AAGCTCTTCT
AAAAACCCAG CCGCGCTTGC TAATACTGTT GTTGTTCTCG ATTTCGAAAC CACGGGTTTA
TCTCCAAACC AAGGCGATCG CGCCATAGAA ATTGGTGCGG TGAAGCTAGA AAATGGCGTT
ATTGTTGATC GCTTTCAAAA ATTGATGAAT CCTGGTTTTA GAGTAAGCTC GTTCATTGCG
AATTACACTG GCATTACCAA TGCCATGCTG ATGGGAGCGG ATGATTGTGC CACGGTCATG
CACGAGTTTG CGGACTTCAT TCAAGGGTGT AATTTAGTGG CTCATAATGC CTCGTTTGAT
CAGCGTTTTT TAGATGCAGA GCTTGACGCG ATTCAGCGAG ATTATGATGG AACGTTCGCG
TGTTCATTAT TGGTATCAAG ACGGCTGACT CAAGAAGCAC CATCGCATAA GTTGGGAGAG
TTAGTGGCTT ATCATCAAAT CGATAATGAT GGTGTGTTCC ACAGAGCGTT AGCCGATGCC
GAAGTGACGG CTTCATTATG GCAAGTGCTG TTAGATACCC TAGAAAGCGA TTATGCGATT
AAAAGCCCTG ATTTTTCATT AATGCAAAAA ATCGCCAAAA CCCCAAAAGG GTCAATCGTT
CAATTTTTAA AGAAACAAGG CTAA
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| Protein sequence | MVSLPTNYMT WKYFVPLSSS KNPAALANTV VVLDFETTGL SPNQGDRAIE IGAVKLENGV
IVDRFQKLMN PGFRVSSFIA NYTGITNAML MGADDCATVM HEFADFIQGC NLVAHNASFD
QRFLDAELDA IQRDYDGTFA CSLLVSRRLT QEAPSHKLGE LVAYHQIDND GVFHRALADA
EVTASLWQVL LDTLESDYAI KSPDFSLMQK IAKTPKGSIV QFLKKQG
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