| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0213 |
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| Symbol | gfa |
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| ID | 6961682 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | - |
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| Start bp | 236279 |
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| End bp | 236842 |
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| Gene Length | 564 bp |
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| Protein Length | 187 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 643381523 |
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| Product | glutathione-dependent formaldehyde-activating enzyme |
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| Protein accession | YP_002264565 |
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| Protein GI | 209809027 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3791] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR02820] S-(hydroxymethyl)glutathione synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACTATTA CAACACTACA CCCAGCAATT GATAACGGTT TTTCAGCTAC AGACGAAAAC
TTCCAAGGCG GAACATTACA CTGCCAATGT AAAGAAAATA AAGTAGCAGT AAAACTGACG
GCACAAACTG CACATAACCA CGCTTGTGGC TGTTCTAAAT GCTGGAAACC TGAAGGTGCT
ATCTTCTCTC AAGTAGCGGT AATTTCACGT GATAACGTTG AAGTCATTGC GAACGCAGAA
AAATTAGTTG TTATTGATGA AGCAGCAACA ATCAAACGTC ACGCTTGTAA AGAATGTGGT
ACTCACATGT ACGGCCGTAT TGATAACCAA GATCACCCAT TCTTTGGTTT AGATTTCGTT
CACACTGAAT TGTCTGAAGA TGCAGGTTTC TCTGCGCCAC AATTCGCGGC ATTTGTTTCA
TCTATTATCG AAACAGGCAC TGATCCTAAA GACATGGATG CTATCCGTGC TCGCTTTGAA
GAATTAGGCC TTCCTACTTA CGATTGCCTA TCTCCAGCAC TAATGGATGC AATTGCAACT
CACATTGCTG CACAAAATAA ATAA
|
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| Protein sequence | MTITTLHPAI DNGFSATDEN FQGGTLHCQC KENKVAVKLT AQTAHNHACG CSKCWKPEGA
IFSQVAVISR DNVEVIANAE KLVVIDEAAT IKRHACKECG THMYGRIDNQ DHPFFGLDFV
HTELSEDAGF SAPQFAAFVS SIIETGTDPK DMDAIRARFE ELGLPTYDCL SPALMDAIAT
HIAAQNK
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