| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0198 |
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| Symbol | |
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| ID | 6961669 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | + |
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| Start bp | 222484 |
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| End bp | 223824 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 643381511 |
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| Product | two-component system sensor protein, histidine kinase |
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| Protein accession | YP_002264553 |
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| Protein GI | 209809015 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR01386] heavy metal sensor kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00722417 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACTC ATTATCTTTC AATGAAATTA AAGCTCACCC TCATGTTTTT CTCCACCTCG
GTGTTTGTGT TTATTGGCCT TGGCATCGCC ATTCAGTATC TCGTTCAATC CCATTTCTAT
GAAGAAGATC GTAATCAACT AACCTCCAAC CGCACTTCCA TTTCCGTCTT ACTGCAAAAC
AAAGGGATTA CCAGTACCGA GATATTTGCA TCATTAAAAA GCAGAGGCAT TAATGTATGG
ATAACCAAAA ATAACGGAGA GCAAACCCAA AACACCAACG TAATCGCAAA TGATGACGCA
TTTTCTCCAT CAAAAGACCT TAACGAGTGG ACGTATAATA ACCACACATT TAGAACCTTA
TATTATCCTC TAAACGCACA TGATGAGTAC ACTGGCCTTC TCATTGGCAT TAACATTGAT
CATCACATTC AATTTAATAA AAAACTCAAA GTTATTTTAA TGTGGTCTAT TAGCATCGCG
AGTTTGCTGT CTTTTCTTTA CAGTTTTTTG ATCGTGAGTA TGGGATTTAA ACCGCTTAGG
TCACTGCAAA ATCGAATCAA AGAAGTTCAA CCAAATAAAT TGCATATCCG ATTATCTGAT
GAAAGTTTAC CCACTGAGCT CATTGAGTTT GCGAGGGTGC AAAACCAAAT GCTTGAACGA
TTAGAATTGG GGTTTCAGCG CTTAAGTGAC TTTTCTTCTG ATATTGCCCA TGAGTTAAAA
ACCCCATTAT CGAACATTGT GACACAAACT CAAGTCACGC TATCGCACCC AAGATCCACA
CAAGACTATC AAGACATTTT ATCGTCTAAT TTAGAAGAAT TAGAACGGAT CAATAAAACC
ATTAACGATA CTCTTTACCT TGCTAAATCA GAAAATGATT TGCTATTAAA GAGTAATATT
CACTTAGATT TAGTCTCATT ATTTGAACCT ATTGTAGAAT ATTACAGCAT CATTTCTGAA
GAGTCAGACG TTACTATTCG GCTTTCTGGT AAGGGCGTGC TATGGGGGGA TAAATCGATG
ATACAACGAA TTGCTAATAA TCTCTTATCA AACGCAATTC GTCATTCAGC ACCAAACAGT
TCTATTTTAA TTGATATCAA AGACAGCCCA AATAAAGTGA AATTATCAAT TTCAAACACA
GGTGACACCA TCCAAGAAAA GGATCTGCCT TTTATTTTTG AGCGCTTTTA CAGAGCCGAT
AAATCACGAC GACATTCAAG CAGCACAGGC GCAGGACTTG GATTAACCAT CGTTCGTTCG
ATTGTAAATG CACATAGTGG AAAGATAACA GTGCAGTCTG CCGATACACA AACAACGTTT
ACCGTTTCTT TCCAAAAATA A
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| Protein sequence | MKTHYLSMKL KLTLMFFSTS VFVFIGLGIA IQYLVQSHFY EEDRNQLTSN RTSISVLLQN
KGITSTEIFA SLKSRGINVW ITKNNGEQTQ NTNVIANDDA FSPSKDLNEW TYNNHTFRTL
YYPLNAHDEY TGLLIGINID HHIQFNKKLK VILMWSISIA SLLSFLYSFL IVSMGFKPLR
SLQNRIKEVQ PNKLHIRLSD ESLPTELIEF ARVQNQMLER LELGFQRLSD FSSDIAHELK
TPLSNIVTQT QVTLSHPRST QDYQDILSSN LEELERINKT INDTLYLAKS ENDLLLKSNI
HLDLVSLFEP IVEYYSIISE ESDVTIRLSG KGVLWGDKSM IQRIANNLLS NAIRHSAPNS
SILIDIKDSP NKVKLSISNT GDTIQEKDLP FIFERFYRAD KSRRHSSSTG AGLGLTIVRS
IVNAHSGKIT VQSADTQTTF TVSFQK
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