Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_II0182 |
Symbol | |
ID | 6961653 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011313 |
Strand | - |
Start bp | 208504 |
End bp | 209349 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 643381500 |
Product | universal stress protein |
Protein accession | YP_002264542 |
Protein GI | 209809004 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAATA TAATAGCGTG TATTGATGGT TCTACATTCA CGTTCGCCAC GTGTGAAGCG AGTGCGTGGG TGGCAAAAAA GGTCGATGCA CCACTTGTTC TATTGCACGC ACTTGATAAA ACCATGAGAC CCGTCGTGAG TGAGTTGTCA GGTCAAATAG GATTAGGAAG CCAAGAAGAG TTGCTTAATG AACTGGCCGA TCTTGATGAA GCTCGCAGTA AAATAGCACT TAAACACGGT AATAAATTAC TGGAAGAAGC AAAGACGTGG GCATCTAAAG AGGGCGTGAG TGATGTCCGT AAATTGCAAC GACATGGAAA TCTACTTGAT AGCCTCATTG ATTTAGAAAA TGAAATTAGG GTGTTAGTGA TAGGTAAATC AGGTGAAGAG AGCAGCATTA ACAAAACAAT AGGCTCACAA CTTGAAAGTG TTATTCGATC TATTAGCGCG CATATTTTGG TTGTTAGTGA GCCGTTTGCT GTGCCTAATT CTTATCTGAT TGCTTTTGAT GGTAGCCCAA CCAGTCATAA ACTGATTGAA AAAGCGATGA AGACGCCGTT GTTAGTTGGT TTAGAATGTC ACTTAGTGAT GGTTGATGAT TCAGGCAATA AGAGTACGGA GTTTGAACAA GCAGCAACGC AGTTGCGAGA CGCAGGCCTT AGCGTTAATG AAAGCATATT GGCGGGATCG GTTGATGAAG CGTTACTTAC GTATCAACAA CAACATCAGA TCGGTTTGTT TGTTATGGGG GCGTATGGGC ATTCTAAATT GAGACAGTTT TTTGTTGGTA GCAATACAAC GGAAGTGTTG GCGAAAAGTA AGGTTCCGAT CTTAGTCATT CGTTAG
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Protein sequence | MKNIIACIDG STFTFATCEA SAWVAKKVDA PLVLLHALDK TMRPVVSELS GQIGLGSQEE LLNELADLDE ARSKIALKHG NKLLEEAKTW ASKEGVSDVR KLQRHGNLLD SLIDLENEIR VLVIGKSGEE SSINKTIGSQ LESVIRSISA HILVVSEPFA VPNSYLIAFD GSPTSHKLIE KAMKTPLLVG LECHLVMVDD SGNKSTEFEQ AATQLRDAGL SVNESILAGS VDEALLTYQQ QHQIGLFVMG AYGHSKLRQF FVGSNTTEVL AKSKVPILVI R
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