| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0112 |
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| Symbol | tolR2 |
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| ID | 6961594 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | + |
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| Start bp | 138108 |
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| End bp | 139463 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 643381434 |
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| Product | biopolymer transport protein TolR |
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| Protein accession | YP_002264476 |
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| Protein GI | 209808938 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0811] Biopolymer transport proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAATCA AACCACTTAT TTTAGCGATG TCTTTATTCG GTTTTTCCCT AAACACGTTA
GCGGCAAGTA GTGAATTAGT TCAAGAAACA AAGCAAGCAA GCCATGTTCA AAAACAACAC
AATGCCGAAC GTGAAGCTGA CTTTATGCTG ACAGAGAAAG AATTTAAAGC ACAAAAGAAC
GCCTTGATTG CTGAGCGTAA AAAACTGCAA AAAGAGAGCG ATGAACTGAG TTCTTTATTC
AGTAGTAATG AGCAATCACT TGCCACGATA GAGCAGCAAC TACATTTAGA AACAGGCAGT
TTAGGTGAGC TGTTTGGTGT GGTAAGACAA ACGGCAAAAG ATCTTAATTC TGAATTAAAA
AACTCAGTGA CTGGTTCAAT TGATGCTAAT AATGCACAAG TGATTAATGA CATTGTAGAG
GCTAAATCAT TGCCATCAAT GACTCAGTTA ACAGGGTTAT GGCAAACCAT GGTTCAACAA
GTGCAAGCGA GTTCAGAATC GGCGTTAATG CCGGTGACGG TAATCAATGG GGCAGGGCAC
CGCTCTGAAA TCAATGCTTA CCGTTTAGGC AATATGGCGC TTGTTGGTGA TGAAGGCTTC
CTACGTTGGG ATAATAAAAA GAGCGTAGCA ACGTATTATT CACAACAGCC AGACCTTGCG
CCATCAGTCG CTACATTATC TGATATGCAA CAGCAGCAAG TAATGATGAT GGCAGTGGAT
CCATCGCGTG GCATCATGCT AGAGCAACTT GCAAATTCGC CAACGCTAAA AGATCGCCTT
CAAGCGGGTG GTGTGGTTGG ACAAATCATT ATCGCTCTAT TGGCAATTGG CCTGCTTATT
TCGTTATTTA ATGGTGCGAG ATTGTTGGTT ATTCGTCAGC AGATCCGCAC TCAATTAAAA
GATCCTGCAC ACATCGGTAA TAATCCTCTT GGTCGTGTTT TATCAGTTTA TGATGCAGAA
AAAACTCGTT CGGTAGAGGC ATTAGAACTT CGCTTATTAG AAACAATTGT TGATGAGCAG
CAAGGCTTAG AAAAAGGCCT ATCAATGCTT AAGCTTCTCG CTGCATTAGC ACCTATGTTA
GGTCTGTTAG GTACGGTTAC TGGCATGATC GAAACGTTCC AAGTGATCAC GCAATTTGGT
AATGGCGATC CTAAAGTGAT GGCGGGTGGT ATTTCTATGG CATTGGTAAC AACCGTATTG
GGCTTAGTTG CAGCGATGCC CCTGTTATTA ACTCACAATA TTTTAAGCTC TCAAGCAGAA
AGCATTCGCA CTATCCTTGA AAAGCAAGGC TTGAGTTTGG TGGCAGAGCA AGCAGAAAAA
GAAACCAATA ATACACCAGT AGGAATGGCA GCGTAA
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| Protein sequence | MSIKPLILAM SLFGFSLNTL AASSELVQET KQASHVQKQH NAEREADFML TEKEFKAQKN
ALIAERKKLQ KESDELSSLF SSNEQSLATI EQQLHLETGS LGELFGVVRQ TAKDLNSELK
NSVTGSIDAN NAQVINDIVE AKSLPSMTQL TGLWQTMVQQ VQASSESALM PVTVINGAGH
RSEINAYRLG NMALVGDEGF LRWDNKKSVA TYYSQQPDLA PSVATLSDMQ QQQVMMMAVD
PSRGIMLEQL ANSPTLKDRL QAGGVVGQII IALLAIGLLI SLFNGARLLV IRQQIRTQLK
DPAHIGNNPL GRVLSVYDAE KTRSVEALEL RLLETIVDEQ QGLEKGLSML KLLAALAPML
GLLGTVTGMI ETFQVITQFG NGDPKVMAGG ISMALVTTVL GLVAAMPLLL THNILSSQAE
SIRTILEKQG LSLVAEQAEK ETNNTPVGMA A
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