| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0110 |
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| Symbol | |
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| ID | 6961592 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | + |
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| Start bp | 135157 |
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| End bp | 137238 |
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| Gene Length | 2082 bp |
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| Protein Length | 693 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643381432 |
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| Product | TonB dependent receptor |
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| Protein accession | YP_002264474 |
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| Protein GI | 209808936 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTTCTA AAAGTCAGTT GGCTCTTGTT ATTGGCGCCG TTTTATCTAT CCCTTTTGCT
TACGCTGAAA CAGATGCATC AACTACTGAT GAGCACATGG TCGTTACTGG TCGTGATTAC
GGTTATAAAG CAGACACAAA CTCAACGTCA ATGCGTATGG AAGCAACGCA ACTAGAAACT
CCTGGGCAAG TAACGGTTAT TGATGAGCAA ATCATTGATG AGCAACGTGC GAGTACACTA
GGTGAAGTGC TGAAGAATGA TTCAAGTATT TCTGAAGGCT CTAAATCAAC GAACCGTGAG
CGTTTTTACT TGCGTGGTTT TAAATTAAGC AGCAGTTCAA GTTTCTTACG TGATGGTGTT
CAACACTGGT CTCATTATCG TCAACCAATT GAGTTATTAG AACGTGTAGA AGTAATGAAA
GGCCCTGCAG GTTTACTTTA CGGTAAGTCC ACGCCTGGTG GCTTAGTGAA CATGATTTCT
AAAAAACCGA CTTATGAAAC ACAAGTAACC ATCAGTCAAG ATATCGGTTC AAATAATTAT
ACTCGTTCAA TTGCTGACGT AAGTGGTTCA TTGAATGAGG ACCAAACATT ACGTGCTCGC
GTGATTTTAT CTCAAGAAAA TCAAGATTCT TGGCGTACAC GTTTTGATGG CACTGCTGTT
GAAACTGATC GTACTGTTGG TGGTCTTTTT GTTGATTATG ATATTAACGA AGACATCATG
CTTTCTGCTC ATTACGATAG AACAAATGAA ATCGGTGATT TGGATAATGG TTCAAAGGTT
GATACAACAA CCGGTGAAGT CATTGACCCA AATACGGTTA AAGACCAAAA CTGGGCGAAG
ACAGACAATG ATGTGGCTAA TTACGGTGTA GGCTTAACTG CAAACTTGAC GGATTCATGG
TCTGTTAAAA CGGGTATTAG CCGTCAGTAT TATGAGCGTC AGCGTACTGA ATCGGATATT
AATAAAGATG GTAGTAGCTA CAAATCATCA GATCGTCATG ATGAATGGAC ATTTGATACT
GCTTATGTTG ATTTCATGGG TGATGTTGAT GCCTTAGGCG TTAACCACCG TTTATTAGTG
GGTGGTAATG GCCTGAATTA TGATTATAAG CGTCAATACG ATAGCTCTAA ATCATGCATA
ACAAGCACTG ATACGTGCAG TGACGGTTTT AATCGCCCTA GTGATTTAAA TTCAAGTAAT
GATACGGTTG GGCCCCACTC TAAGAGCCAA CATTACGGTA TTTACCTTCA AGATTTAGTG
ACATTTAATG ACTCTTGGCA GTTACTTGCT GGCGCACGTT TTGCTGTAGA TAAAACAGAA
GACAGCAAAG GAAAAAAAGA AGATTACACT AACATTCTTT CTAAGCTTGG TGTTATTTAT
CATCCTGCTG AAAATGGTTC TATTTATGCC GTATATTCTG AAAGTTTTGA ACCAGTAGCA
ACGATAAATG ATGCTGATGA TGTGAATGAT GGTCAAAAAC AAGATCCAAT GAAAGGAAAC
TTATACGAGT TAGGATCTAA GTGGGAACTA TTAGATAACA GCTTGTATGT GTCTGGTGCT
TTATTCCAAA TTGTACAGTC AAACATGCAA GTGTCTGAAG ATATTAACGG TGGTTCAAAT
ACACGTACTT CACAGGTCGG TGAGCAAGTT CATACTGGTA TTGAATTAGC GGCGACGGGT
TACCTGACAG AAGCGTTCTC ATTAAGCGCA TCAACGACAT TTCTTGATGC TAAATATGAA
AATGATCCAG CGTTAGAAGG TAAAACACCT GCGGATGTAC CTGAATTTAG CGCAAGTATT
TGGTCTCAGT ACGATTTCAA TAACGGCACA GGTATTAACC TTGGTGTTTA TCACGTAGGC
GAGCGTTATG GTGATTCTAA AAACGAATTC AAAAAAGACG CTTATACACG AGTAGATATG
GGTATCTCAC ATACCTTAAA GTACGACGAC AGTTTAGATT TTGTCGCTCG ATTTAATGTA
GAAAACCTAT TAGATACTGA TTATTTAGCT GGTGGTAGTG CAAGTGATGT GGTTGTTGGT
GAAGGCCGAA ACTACATGGC GACACTGCAA GTTAAATACT AA
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| Protein sequence | MFSKSQLALV IGAVLSIPFA YAETDASTTD EHMVVTGRDY GYKADTNSTS MRMEATQLET
PGQVTVIDEQ IIDEQRASTL GEVLKNDSSI SEGSKSTNRE RFYLRGFKLS SSSSFLRDGV
QHWSHYRQPI ELLERVEVMK GPAGLLYGKS TPGGLVNMIS KKPTYETQVT ISQDIGSNNY
TRSIADVSGS LNEDQTLRAR VILSQENQDS WRTRFDGTAV ETDRTVGGLF VDYDINEDIM
LSAHYDRTNE IGDLDNGSKV DTTTGEVIDP NTVKDQNWAK TDNDVANYGV GLTANLTDSW
SVKTGISRQY YERQRTESDI NKDGSSYKSS DRHDEWTFDT AYVDFMGDVD ALGVNHRLLV
GGNGLNYDYK RQYDSSKSCI TSTDTCSDGF NRPSDLNSSN DTVGPHSKSQ HYGIYLQDLV
TFNDSWQLLA GARFAVDKTE DSKGKKEDYT NILSKLGVIY HPAENGSIYA VYSESFEPVA
TINDADDVND GQKQDPMKGN LYELGSKWEL LDNSLYVSGA LFQIVQSNMQ VSEDINGGSN
TRTSQVGEQV HTGIELAATG YLTEAFSLSA STTFLDAKYE NDPALEGKTP ADVPEFSASI
WSQYDFNNGT GINLGVYHVG ERYGDSKNEF KKDAYTRVDM GISHTLKYDD SLDFVARFNV
ENLLDTDYLA GGSASDVVVG EGRNYMATLQ VKY
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