Gene VSAL_II0092 details

Gene Information

• Locus tag: VSAL_II0092
• Symbol: fruA
• ID: 6962465
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aliivibrio salmonicida LFI1238
• Kingdom: Bacteria
• Replicon accession: NC_011313
• Strand: +
• Start bp: 115402
• End bp: 117141
• Gene Length: 1740 bp
• Protein Length: 579 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 643381418
• Product: PTS system, fructose-specific IIBC component
• Protein accession: YP_002264460
• Protein GI: 209808922
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG1299] Phosphotransferase system, fructose-specific IIC component; [COG1445] Phosphotransferase system fructose-specific component IIB
• TIGRFAM ID: [TIGR00829] PTS system, fructose-specific, IIB component; [TIGR01427] PTS system, fructose subfamily, IIC component

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.52822
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAATA TAGCTATCGT AACAGCATGC CCAAGTGGTG TAGCAAACAG CATTATCGCC 
GCTGGTTTAT TAGAACAAGC AGCAGCGAAA CTAAACTGGA AAGCCTCGAT TGAATGTCAA 
TCAAGTGTGT TACCTGTTGA TGTATTAACT CAAGAGATTA TTGATACCGT CGATGCAATT 
ATTATAGCAA CGAATACCGA TATTGATACG ACACGCTTTG TAGGAAAAAA AGTACATCAA 
GGTTCAATTT CTGATTGCAC GACTAACCCA CAAGCGTGGT TAGAAAACGC AGTAAATACA 
GCAACCGAGC TAACGGCTTC AGAAGTAACG ACAATCAACG AGGTTGTTGT TGATTCAAAT 
GCAGTTAAAA AAATTGTTGC TATTACGGCT TGCCCAACGG GTGTTGCCCA TACTTTCATG 
GCCGCAGAAG CACTAGAAGA AGAAGGTAAA CGCCAAGGCT ATTTTATTAA GGTAGAAACA 
CGCGGTTCCG TAGGTGCTAA AAATCAGCTG ACTGATCAAG ACATCGCGGA TGCGGATCTT 
GTTATCATCG CTGCGGATAT TGAAGTGCCT CTTGAGCGTT TCAACGGCAA GCGTTTGTAC 
AGAACAAGTA CGGGACTTGC TCTGAAAAAA ACAGAACAAG AAATGAATAA AGCATTTGCA 
GAGGCAACGG TTTTCCAAGC GTCTGGTAAG GCTCAATCTT CTCAAGCAGA AGAGAGTAAA 
GGCATGTACA AACACCTAAT GACAGGGGTA TCACACATGC TTCCTGTCGT AATTGCAGGT 
GGTTTGTTGA TTGCGCTTTC GTTTGTGTTT GGTATTGAAG CGTTTAAAGA ACCCGGTACG 
ATTGCAGCAA CGTTAATAGA CATTGGTGGT GGAGCAGCCT TCGCCTTGAT GATCCCTGTT 
CTTGCTGGTT TCATCGCGTT CTCGATTGCT GACCGCCCTG GTTTAGCGCC GGGTTTAATC 
GGTGGTATGT TGGCGAGCTC AACAGGCGCT GGTTTCCTTG GTGGTATTGC TGCCGGTTTC 
ATTGCGGGTT ATGCAGCAAA ATTCATTGCA GATAAAGTGT CTCTTCCTCA ATCAATGGAA 
GCATTAAAAC CCATTCTAAT CATTCCGTTT GTGGCGAGTT TGTTCACCGG TTTGGTCATG 
GTTTACATCG TTGGTGGCCC AGTAGCAGGC ATCATGTCTG CACTGACTGA GTTCTTAAAC 
AACATGGGTT CAACTAACGC GGTATTACTG GGTGTTATCC TTGGTTGTAT GATGTGTTTC 
GATTTAGGTG GTCCAGTAAA CAAAGCCGCT TATACGTTTG GTGTTGGTCT GTTAGCGTCA 
CAAACTTATG GTCCAATGGC CGCAATTATG GCCGCAGGTA TGGTTCCTGC ACTTGGTATG 
GGCTTAGCGA CATTTCTTGC TAAAAATAAA TTTGAAGCGG GCGAGCGTGA AGCGGGCAAA 
GCGTCATTCG TGCTTGGTTT ATGTTTTATT TCTGAAGGTG CGATTCCATT TGCAGCGAAA 
GATCCAATGC GTGTTATCCC AAGCTGTATG GCAGGTGGTG CATTAACGGG TGGTCTGTCT 
ATGTTGTTTG GTGCTCAGTT ACTCGCGCCA CACGGTGGTT TATTTGTTCT TCTTATTCCA 
AATGCGATTA CACCCGTGTT CATGTACTTG GTAGCGATAG CTGCAGGTAC TGCGGTAACT 
GGTTTCACTT ACGCTTTCTT GAAAAATAAA GCGGATGCGA AAGAAGTAGT CGCTGCATAA 

 

Protein sequence

MKNIAIVTAC PSGVANSIIA AGLLEQAAAK LNWKASIECQ SSVLPVDVLT QEIIDTVDAI 
IIATNTDIDT TRFVGKKVHQ GSISDCTTNP QAWLENAVNT ATELTASEVT TINEVVVDSN 
AVKKIVAITA CPTGVAHTFM AAEALEEEGK RQGYFIKVET RGSVGAKNQL TDQDIADADL 
VIIAADIEVP LERFNGKRLY RTSTGLALKK TEQEMNKAFA EATVFQASGK AQSSQAEESK 
GMYKHLMTGV SHMLPVVIAG GLLIALSFVF GIEAFKEPGT IAATLIDIGG GAAFALMIPV 
LAGFIAFSIA DRPGLAPGLI GGMLASSTGA GFLGGIAAGF IAGYAAKFIA DKVSLPQSME 
ALKPILIIPF VASLFTGLVM VYIVGGPVAG IMSALTEFLN NMGSTNAVLL GVILGCMMCF 
DLGGPVNKAA YTFGVGLLAS QTYGPMAAIM AAGMVPALGM GLATFLAKNK FEAGEREAGK 
ASFVLGLCFI SEGAIPFAAK DPMRVIPSCM AGGALTGGLS MLFGAQLLAP HGGLFVLLIP 
NAITPVFMYL VAIAAGTAVT GFTYAFLKNK ADAKEVVAA