Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_II0090 |
Symbol | fruB |
ID | 6962466 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011313 |
Strand | + |
Start bp | 113254 |
End bp | 114390 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 643381416 |
Product | bifunctional PTS system fructose-specific transporter subunit IIA/HPr protein |
Protein accession | YP_002264458 |
Protein GI | 209808920 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1925] Phosphotransferase system, HPr-related proteins [COG4668] Mannitol/fructose-specific phosphotransferase system, IIA domain |
TIGRFAM ID | [TIGR01003] Phosphotransferase System HPr (HPr) Family |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGACAC TGACAAAGAA TGACATTACG TTGCAACAAG CGGCAGCGGA TAAAACAACA GCCATCAAGG CAATCGCAAA GCAATTAACA GAGAAAGGAT TAGTTGCTGA AAAATATGTA GAAGGCATGC TAAACCGTGA ACAACAAAAT TCAACGTTTT TGGGTAATGG TATTGCCATC CCACACGGCA CAACAGATAC CCGTGAACTA GTAAACAAAA CAGGCGTTGC TGTTCACCAT TTTCCTCAAG GCGTTAATTG GGGCGATGGC AATGTGGTTT ATGTCGCGAT TGGTATTGCT GCTAAATCAG ATGAACATTT AGGAATCTTA AAGCAACTGA CAAAAGTGCT TTCGGCAGAT GGTGTTGAAG AAAAACTGAA ACAAGCGAAA AGCGAAGCCG ATATTATTGC TTTGCTTAAT GGTGAAGTTC AGTTTGAAGC CGATTTTGAT GCGTCATTAA TTAAATTGCT TTTTCCGGCA AGTGACATGA TTCAAATGAG TGCGGTTGCC GGTGGTTTAT TAAGAAACAG CGGTAATGCT GAAAATCAAT TTGTTGCAGA GTTAGTAACA AAAGAGCCGA CTCACTTAGG TAATGGTTTG TGGTTAGTGA GTACTGACAA AGGCGTTAAA CGCTCTGGTA TGTCGATTGT GACGACTGCT AATGGGTGTG AGTTTAATGG ATTAGCGGTG AAAGGGTTAA TTGCTATTGC GTCTTGTAAT GCCTCACACA AATCGTTTTT ATCGATTATT AGTAAAATGG TGTTTGAACA GAAACAAGAT CAATTATTAT CTGCTAATTC TGAGCAGTTA TTAGCTATGT TCGCAACCTC TTCTGAAGAA ATTGTTGCAG AAGTAAGCGC GGATAACACG GCAGTATTTA CAATAAAGAA TGCACACGGC TTGCATGCTC GTCCAGGAGC GATGCTTGTA TCTGAAGCGA AGAAATACGA ATCAAAAATT ACAGTATTAA ATCTTAATGG GGATGGTAAA TCAGCAAATG CAAAAAGCTT AATGAAAGTG ATTGCGTTAG GTGTGAAGCA CGGCCATGAA CTGCAATTTA CGGCGGATGG CGTTGATGCA AAAGAAGCAC TAGTGGGTAT TGGTGCTGCC ATCGAATCTG GTTTGGGCGA GGGTTAA
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Protein sequence | MLTLTKNDIT LQQAAADKTT AIKAIAKQLT EKGLVAEKYV EGMLNREQQN STFLGNGIAI PHGTTDTREL VNKTGVAVHH FPQGVNWGDG NVVYVAIGIA AKSDEHLGIL KQLTKVLSAD GVEEKLKQAK SEADIIALLN GEVQFEADFD ASLIKLLFPA SDMIQMSAVA GGLLRNSGNA ENQFVAELVT KEPTHLGNGL WLVSTDKGVK RSGMSIVTTA NGCEFNGLAV KGLIAIASCN ASHKSFLSII SKMVFEQKQD QLLSANSEQL LAMFATSSEE IVAEVSADNT AVFTIKNAHG LHARPGAMLV SEAKKYESKI TVLNLNGDGK SANAKSLMKV IALGVKHGHE LQFTADGVDA KEALVGIGAA IESGLGEG
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