Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_II0083 |
Symbol | |
ID | 6961569 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011313 |
Strand | - |
Start bp | 108268 |
End bp | 109188 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 643381409 |
Product | putative permease |
Protein accession | YP_002264451 |
Protein GI | 209808913 |
COG category | [R] General function prediction only |
COG ID | [COG0701] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTACAA TTACACAAGA CATGGTGATG GACACCCTAA ATATGTTCGC TTTCTTAGCG GCAGAATTAA CCGTACTGTT CCTATTAATT AGCTACCTTG TTGGCGTCTT ACAGGAATAC ATTCCACCTG CAAAGATCCA ACGTATTCTA AGTGGGAAAA ATGGCCGAGG CTATATTGTT GCTGGCTTAT TAGGAGCGAT TACTCCATTC TGCTCATGCT CAACCATTCC TTTCTTGAAA GGTCTATTAC GAGCGAAAGC CGGTTTTGGT ACAATGATGG TCTTTTTGTT TGCAAGTCCG CTACTAAACC CAATTATTAT TGGTCTGTTT GCGGTGACAT TCGGACTTAA AGTCACCCTG TTCTACTTTG CGATTGCGAT GGGCGTTTCA ATCATTGCGG GCTACGCATT AGAAAAACTG GGCTTTGAAA AATACGTAAA AGAAACTGCA TACATTACAC CAGAGCCAAA AAGTTGCGGT TCAACCTGTG GCAGCGCGAA AAAAGCGCCG CAAAGCAAAT GGGTCAAAAT TTGGCACAGC ACATGGACTG ATTTTAAGAA AGTATTGCCT TACTTGATTG GTGGTATCGC ACTTGGCTCT ATGATCTACG GCTTTATGCC AACGGAATTC GTTGCTCGTA TCGCAAGTGA AAATAACCCA TTTGCAATCC CAGTCGCGGC AGTCATTGGT ATTCCACTTT ATATTCGTGC TGAAGCGGTA ATTCCACTAA GTGCTGCACT TGCTGCAAAA GGCATGAGTT TAGGCGCAGT AATGGCATTA ATCATTGGTA GTGCTGGCGC AAGTTTAACC GAAGTGATTT TACTTAAATC TATCTTCAAA AACCAAATGA TTATCGCATT CTTAGTTGTC ATTTTAGGTA TGGCGGTAAG TGCTGGTTAC TTATACCAAT TCATATTCTA A
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Protein sequence | MFTITQDMVM DTLNMFAFLA AELTVLFLLI SYLVGVLQEY IPPAKIQRIL SGKNGRGYIV AGLLGAITPF CSCSTIPFLK GLLRAKAGFG TMMVFLFASP LLNPIIIGLF AVTFGLKVTL FYFAIAMGVS IIAGYALEKL GFEKYVKETA YITPEPKSCG STCGSAKKAP QSKWVKIWHS TWTDFKKVLP YLIGGIALGS MIYGFMPTEF VARIASENNP FAIPVAAVIG IPLYIRAEAV IPLSAALAAK GMSLGAVMAL IIGSAGASLT EVILLKSIFK NQMIIAFLVV ILGMAVSAGY LYQFIF
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