| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0078 |
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| Symbol | |
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| ID | 6961564 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | + |
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| Start bp | 103330 |
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| End bp | 104484 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 643381405 |
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| Product | putative aminotransferase |
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| Protein accession | YP_002264447 |
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| Protein GI | 209808909 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAATCG CTTATTCACT GCAACAGATC CAATCTTCTT ACATCCGAGA GATCTTAGCC
GCAGCCACTG ACAAGAATGT CATCTCACTT GCAGGTGGAT TACCTGATCA AGAGACGTTC
CCAATTGATT TGATGAAACC AACATTAGAA AGTCTGTCTG ATATGCCAGA AGTCTTTCAA
TACGGGGCAA CGGCAGGTTA TGGACCTCTG TTGGCGCTTC TAACAGAAAC CTACCAATTA
CCAGACACAC ACATGCCTAT GATTTGTACG GGTTCCCAAC AAGGCTTAGA CCTTATCGCT
CGTGCTTATG TAAATCCAAA TGATACTGTT GTAATGGAAG CACCTAGTTA CCTTGGTGCA
ATGCAAGTGT TTGGCTTAGT TCAAGCGAAT ATTGCGACCG TTTCTCAAAC GGATTTTGGC
CCAAATCTTG AAGAACTAGA ACAATGTTTT ATTCAAGATT CGCCAAAAAT GTTTTACGCC
GTACCTGATT TCCATAATCC AACTGGGGTT TGTTGGTCAT TAGAAACACG TAAAAAAGTG
GCTGAGCTTT GTATTCAATA CAAGGTTGCA TTTATTGAAG ATGCCCCTTA CCGTGAACTC
CGATTTACTG GTGAAGTACT TCCAATGGTG TCCACTTTCT GCCCACAAGA TTCTATCGTG
TTACGTTCAT TCTCAAAAAT TGCTTCACCG GGTTTACGCA TCGGTGCGGT TACAGGCAAG
ATAAGCTACT TAGAACCATT GATTAAAGTG AAACAAGGCG CTGATTTACA CTCAAGCGTG
CCTATGCAAG CGTTGCTTGT TGGTTTACTT AAACATGAAA AATTTGAACA GCACATGGAA
AGAATTCAAA CGTTATACAA AGAACGTTAT GACGTACTAT TTGCTGAACT CAAAAAACAA
CTTCCGTCAT CTTGCGAGCT TAAACCCGTA GATGGCGGCA TGTTTATTTG GCTATCTCTG
CCAGATTGCG ACACGTTTGA GTTAGCAAAA ACATTAATTG GCAATGGCGT TGCGGTTGTA
CCTAGCCCAG TGTTTTATCC TAATCCAGAA AACAGTCCTG CGGCATTACG ATTAAACTTC
ACCAATGCAA AACCAAAAGA ATTGGTTGAA GCCGTAACTC GCTTGGCTAA AGTATTAAAC
AAGACATTGA ATTAG
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| Protein sequence | MEIAYSLQQI QSSYIREILA AATDKNVISL AGGLPDQETF PIDLMKPTLE SLSDMPEVFQ
YGATAGYGPL LALLTETYQL PDTHMPMICT GSQQGLDLIA RAYVNPNDTV VMEAPSYLGA
MQVFGLVQAN IATVSQTDFG PNLEELEQCF IQDSPKMFYA VPDFHNPTGV CWSLETRKKV
AELCIQYKVA FIEDAPYREL RFTGEVLPMV STFCPQDSIV LRSFSKIASP GLRIGAVTGK
ISYLEPLIKV KQGADLHSSV PMQALLVGLL KHEKFEQHME RIQTLYKERY DVLFAELKKQ
LPSSCELKPV DGGMFIWLSL PDCDTFELAK TLIGNGVAVV PSPVFYPNPE NSPAALRLNF
TNAKPKELVE AVTRLAKVLN KTLN
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