| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0054 |
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| Symbol | |
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| ID | 6961541 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | - |
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| Start bp | 71442 |
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| End bp | 78503 |
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| Gene Length | 7062 bp |
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| Protein Length | 2353 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 643381383 |
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| Product | hypothetical protein |
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| Protein accession | YP_002264425 |
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| Protein GI | 209808887 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTATTG GTAATAATAA TGACAACGAA GATCTAAATG GTGCAGTTGA GCAAGTAGTA
ACCGAAGATA GCTCATCTTC TTCAAATAGC CCTACGGGTA ATCAAAATAA TCAACAATCC
ACAATGGCGA ATACAGTTGC AACAGGGACT GATGCCGTTG CTCCATTAAT TGCCGATGAT
GAATCACAAC AGAATGACGA AGATGATTCG AGTGGTTCAC CAATAGTAGA AAATTCAGAA
GAAAGTAACA CTGAAGCCGT TAATGATGAT GAAAGTAATG AAGCAAATGA TGATACTGGT
TCAAATGTGG TTGATGGTGA GTTGGATGAG GATGAATCTA CTGACTCTAA TGCGCCTAAG
GCACCATCTA GTGGCGACAC TCAAAATGTA GGAGGCGAGT CTTCAGGTTT GGAACCTGCG
TCTCCAAATG CTCAAAATTC TGATTCGCCA GCCCCTAACG GCCGCTCGTC TTCTGTCAGT
AGTGGTGCCG AAGGTACTGG TTCTGAAGGC GAGGTATTTA GAGATGGAAG CATCGATACT
CATACCTTTG GTGTCAATGT AGAGCCTGAA CGATCCGTTT ATTCAAATGA ATTAGAAAAC
TCAGACGTCA CCACTGATAC GATGACGTTT GCGGTTAATG TGTCTCCAGT GAACGATGCG
CCAACCGCGG TCGATAAACT ATTTACGATG CAAGAAGATG GTGTTATCAC GTTTACGGCA
GAAGAATTGT TAGCAGGATC TGCGGATATT GATAGTGAAA CGCTACACAT TGATACCGTG
ACTTATACCG GTATCAATGG GGTACTGTCT GAAAATATGG ATGGCAGTTT TTCTTTTGCG
CCAAATGAAA ATTTTAATGG TCATGTTGAT CTGAGCTTTA CGGTTTCAGA CAGTGAAGCA
ACGGTTGAGG CCAATATTGG GCTAACGATT GAAGGGGTTA ACGATATCCC TGTTGCGGGA
GCGACCTCTT ACCAAGTAGA TGAAGATCAT GTGCTTACAT TTAATAATCA ACAATTACTT
GCTAATTCAA GTGATGTTGA AGGTGATGTA GCGGTTCAAT CGGTTGTTTA TTCTGGTTTT
GAAGGCGAAT TGGTTGACCA TGAAGATGGG ACATACTCAT TTACACCAAA TGAAAATTAC
TATGGTGAAT TAAACTTTGA TGTCGTCATT ATTGATGATG AAGGAACGAT TGCAAGTACA
ACGGCAAATA TTCAAATCGT GTCTATTAAT GACCCTGTTA TTGCAGTAGA TGACTCAGAA
TTAGGAGCAA GTGAGTCTCT GATTAGACTT GATTCTGCAC CAGAACACGG TACGTTAGAA
TACTTAAATG ATGAATTCGA ATGGGTTGAA ATGGTGGTGG GGGAAGAATA CCCAGCTGAC
ACTGAAGTTC AATTTGTCGC TAATGTAGAA GATGTGCAAT CTGCCACTTG TGATATTGAA
GTTGGAAGTT TTGATAATAA TACCGAGACC ACTATTTTTG ATGGCACAGC AAGAACCTCT
GATTGGGGTG AAGTGAGTGG TAACACTGCG GTATTTACCA AGGAAGGTGT CACGATTACA
ACCGAAACCA CCAACGGTGA CTTGTTTGCT TGGAATGGTG CTGGTACAGC AATGGGAGCC
GGTATTGGTG ATACAAGTGA CAATGGATTA TCTAATGATG ATAAGTTAAT TGTCACCATT
GAGGGCGAAG ATGTAAACCA AATCACATTC CAACTTGATG GTCTTGGTAG CTGGTTCGAT
GAATCTGATT CTCATGCTAC TGAAGTGATG ATTACGGCTT ATGACGCAGA AGGTAATGTT
ATCGATTCTC AAGGTGATTA CCGAGAATCG GGTGATTTTC AAGACGAATA TTCATTTACA
ACAAACCAAC CTGTACATCA CTTTGAATTA GGAACCTCAG GCGGAGGAGG AACTTACGTT
GTTCAAAATA TGACGGTATC TCGTACACTG TCAGAAGAAC TTCAACTTGT TACTATTCAA
CCGGATGGTA GTGAAACCAA CAGTGAATTC ACGCTTGATT TAAACTACAA CACTGCAGGT
CAGCCCATTG ATGTAACCGA AGAGTTGATC AATGTTGATG GCGATATTAC CTCAACACCG
ATTCAAGTGC TAGAAGACGG TCGATTAATA TTGAATGTCA GTGATTTATT AGCCAATGAT
ACCGATGCCG ATGGTGATCC TCTTACTATC GTTGATGTGC ATACCACGGA TAATTCTCAT
GGTGAAGTGA CATTAACTGA AGATGGACAA ATACTTTATA CGCCAGATCC AAACTATTCA
GGAGAGGCCG ATTTCCATTA TGTCGTAACC GATGGTAATG GTTCGTTTGA TTCAGCAACC
GTTACTGTCG ATGTTATCCC TCAGCAAGAT GCGCCAATTA CAACGGGTAA CCTTGAGCTT
ACTATTGATG AAGATGGGAC AATTACCTTA ACTCAAGAAG AATTATTAGC GAATGCTGTC
GATGTTGATG GTGATGACTT AACGGCATCG AATCTTTCTG TGGGTGAGAA TGCTGACATT
GTTGAGAATG AGGATGGCTC ATTTACGATT ACTCCTGATG AGGATTTTAA TGGTCAGTTA
GACATTCGTT TTGATGTGAG TGACGGCATT GATGTTGTTG CAGCAGGAAT TGATTTAACC
GTCGATGCAG TAAATGATTT AACGGTGGTT TCTGGTGATG TATCGGCATC AACGGATGAA
GATCATTCGA TCACGATTAC TCAAGCGCAA TTATTAGCAA ACGCTGCAGA TATTGATGGT
GATGCTTTAT CTGTATTTGA TTTGGTTGCT GAAAATGCAG AAATAGTGTC GCATGATGAT
GGTTCATTCA TTATTACGCC GCACCAAGAT TTTAATGGGA TGATTAATGT TAATTATGGT
ATTCATGATG GAACCGATAC CGTAGCATCG AATCTACAGT TAACGGTTGA TCCTGTAAAC
GATGCCCCTA CATTTACAGA AGCCAATTTT GTTGCTAATG AAGACGGCTC GATTTTAATC
ACGGCTTCTG AGCTACTGCA AAATGCATCA GATATTGATG GTGATACACT TTCTATTTCT
GGAATTTCAG TCCCTGAAGA TCAGGGCATG GTTGTTCAAG ATGAAAATAG AGATTGGCTA
TATACCCCAA ACCCTGATGC GAGTGGAGAG GTGGCATTAA CGGTGAGTGT TTCTGATGGA
ACCGTCGCTG TTGATTTCGC TTCAACGATC AGCATAACCC CAGATGCCGA TGCTCCTACC
TTAACGCTTT CACTGGGTAA TGCTTCGATT ACTGATTTCC CCGCAGAAGA TGATGGCAAC
GTTAATGACA TCCTTGCACA GTGGAGCACT GATAATACGT CAGGTCTCAT TGAAACAAAT
CAAGAGTCTG TTTATACCGG CGTTGATGAT GGGCGAGGCC GAGTTATTGA ACTTGAAGCT
CACCCTGGTG ATGAGTCGAA TATCTATCAA GACTTGGATC TTCAAGCGGG AGAAACGATC
TCTTTAACAT TTGATTACTC AGCACGAGAG GGTTATGTCG GAGAAGGGTC ACAAATTGAT
GTTTATTTTG ATGGTCAACT GATCGACAGT ATTACTCAAC CCACGGTTGG TTGGAGTACT
TATAACTATG AATTAACCGC AACAACAGAC AATCCGCGTC TGGAGTTTGA TGCTCCAGGA
AGTGACAGTT TAGGCGGTGT ACTTGATAAG ATACAAATCG TAGAAGTACC CGTTGAAGAC
CAAAATATCG GAATTGATAT TAGTGCGGCT CTAACGGATA TCGATGGATC TGAAAGCATG
CAATCGGTGC TTGTCGAGAA TATACCTGAA GGCGCAATGT TGAGTGATGG TGTTAATACC
TTTACCGCAA CAGCAGATGA AAACTCGGTA GATGTAAACG AATGGGCGCA AAATGATGTG
CAGTTTTTAC CAGCAGAAAA TTTCAGTGGT GAAGTGAATC TTCAAGTGTC TGCTACATCA
GTAGAGAATT CAAATGGAGA TACAGAGACA ACAACGTCAC CATTAACATT TACTGTTGAA
GCGGTGGCTG ATGCACCAGA GCTAGTGATT ACCGATGGCG ATGGGCAAGT GATTGAAGAA
GGAGATGAAA TTCGAGATGA TGCTAATATC ATCGAATTGA ATTTGGGTGC CGAGTTGGTA
GACCAAGATC TTTCTGAAAC GTTAAGTGTG ACGGTTGGTG GTGCACCAGA AGGCAGTGTG
ATTCATTATG ATGGAAGTAC CATTATTAAT GATCAAACCA ACGGCTTAAC CAGTTATGCA
GATACCAATA TTACCGTGAC TTTCGAAGGT GAAGATGCAG GATTCCAAAA CTCTGCAGGT
TATTACATTG TAGAAGAAGA TGGGTCAATT TCGGGTGTTG AGCTGATTTA TGATAATGCT
TCACAACAAG GTTCCGGTGG GAATTTGATC CCGGGTAGCT CTTCTTTCTC GTTTGGTATT
GAAGAAGGAC AAAGCTTTAA CTTATTTGTT GTGCCAAATG GGTTTAACCA TAATAACTTT
AACTCGATGC AAAATGGTCA GTTTGTATTT AGAGATGAAG ACGGTTCTCA ATCAACAATG
AGTTCTGTTG ACCCACAATT AATATTTATT AATGAGGATG GCATTGAAAC TCTGGTTCGG
AGCCAAAATG GGGATACGGT TTATCATGGT GGTAACAGCA CTAACTTAAA TCAAGATGGC
GTTGAACATA CTCGAACCAC GATGAATGAA CAAGGTGAAC TGGTTTATGG CATTGAGGAT
CTTTATGGTG GTGGCGATCG AGATTACGAT GATTTTACCT TTACCATAGA TTTAGGTGAA
GTGAATCAAT CCATTTATAG CGGTGAAATC CCAGTGATTG GTGATGATCC TATTGTTATC
CCTACCGTGA TTTTGGACCA AGTATTAACA CTTGAATTAC CCGAAGGGTT TAATGATGAA
TTTGATTTAA TCATTGAAGC AACATCAACG GAAGAATCGA ACCAAGACAG TGCAACAACA
ACACAAACAA TCCATATTGA TGCCATTGAG TATGCACCTG AAGTCACGCC AATAAGCGCA
GTAATTGATG AAGACAGTTC AATTACACTA ACTCAAGATG AGTTGTTAGC AAATGCGACC
GACATTAATG GTGATGATTT AATCGCGACG AATCTTGTTG TTACGAATGG GGGGGCAACT
GTTGTCTTAA ATGAGGATGG TTCATATACC ATTACTCCAG ATGAAAACGT GAATGGTGCT
CTTGAAGTGA GTTTTGATGT GAATGACGGA TTGCATACCG TTGCGACAGA ACTTCAATTG
GCGGTGACTC CAATTAATGA TGCGCCTATT GCTCCAACGA TAGTGGTAAG TGAAAGTGAA
GATGACGTAT TACTGATTGA CCCTAATTTT ATCTTATCTC AAGCAAGCGA TATCGATAAT
GTGGATCTGA TCCTTGAAAG TATTAGCATT CGTTCACCAG CACAGGCGTC ACTGACTCAG
AATCAAGAGG GTTTATATCA AGTTGTTGTG CCTGAACATT TCAACGGGCC AATTGATATT
GCTTATGTCG TCAGCGACGG TGAGCTAAGT ACCGAAGGAA CGGTAAATGT GAATATCATC
CCTGTTGATG ATGCGCCATT CCAATCGGGG AATGCACATG TAGCGACGGA TGAAGATGGT
GCAATCACCT TCAATAGCGC GGATCTTATT GACCTATTTG GTGATGTAGA TAGTGCATTA
ACGGTATCAA GGGTGATCAC GGCAGAGGGG GAGGAAGCAG AAGGTACCGT CATTGACAAT
GAGGATGGTA CGTGGACATT TACTCCAACA GATGACTTTG CTGGTACAAC GGGTCTACAA
GTCGTTGTTA CCGATGGTTC GACAGAAGTT AGCATGGACA TGAATGTGTA TATTCGTCCT
GTTGCTGATG GCGTTGCTAT AACGACCAGT TTTGATGGGC CATTGGTCTT CCCTGAAGAT
TCAACGGGTC ATTTCGGGCT GAACATTGAG CAATTAGATA CCTCTGAAAT TATGACGAGT
GTTGTGATGA CAGGGTACCC AGTTGGGTTT GTTGTTAGTG ATGGCGAGCA TACCGTAACG
ATAACTGAAG AAGGCCAAGG TGTTGATATT GGTGATTGGA ACCTAGATAG CATGACAATG
GTACCGCCAG CGGATTTCAA CGGTAATTTC TTTGTTACCG TGTCGGTTGT GTCATTGGAT
GAAGTCGAAG ATCCAGCAGA TAACCCGATT ACCCAAGAAT TGGGCAGTAA TCATTCGGAT
GAGTCTCCTT TTGAGCTTGA TGATGATGGT TATGCTCTAT TATTGAGTGC TGATTTACTG
AATTCTCTTG ATAATAATAA CGCTGAGAAT GTCATTTCTG ATGTGATATA TTCAGGAGAC
AACGGAACTC TTATTGATAA TGATAACGGG ACGTGGAGCT TCTGGACAAA TCCAGATTAT
GATGGAGAAG TAAATGTCAA TTTCTCAACA TCTGACGGTG TAAGTCACCA CGTTATTTTG
ACACAAGACA GCGTAGAGAG TGACTCTGCA CCAATAACTC AAACGAATAT TGCAGAGCCT
CAAGGAGCAC AAACTGAACC AGAAACAGAG GCGGATTATA CCGTTGCGCC GGGGGATACT
CTTAATATAG ATATTCCGAC GGAAATATCT GAAAATGCAG ACGTTGATCA TATTCATATT
ATTGGCCTAC CTGATGGTGT GGAGCCAACT CAAGGTTTAT CGGATGGAGA GGGTAATTAT
GTAATCAGTG ATACTTCTCA ACCGATTACA CTTAGTATAG ATGAGAGTGT TTCTGGCGAT
GTCAGAGTTG AGATGATGGG AATGACAGCA ATGGATGATC CTATTGATGG TGCGGTTGGT
TTCAGCTTGA TTGATGTAGA TTCAAGTTAT GAAATGCAAG GGAGTAGTGC AGATAATGCG
GACGCGTCGG TTCAAGGTGG TGATGATTCA TCAGGCCAAG ATTGGACAAC TGCAGACAAT
ACCGACGTTG GTGTCGATGT AATGGATGAC AGCTCAAGCT TTGATTCAGC AACTCAAGAA
ACAACGGCAG ACGATGATTT ATCGATGCTT AATGATAATT AA
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| Protein sequence | MAIGNNNDNE DLNGAVEQVV TEDSSSSSNS PTGNQNNQQS TMANTVATGT DAVAPLIADD
ESQQNDEDDS SGSPIVENSE ESNTEAVNDD ESNEANDDTG SNVVDGELDE DESTDSNAPK
APSSGDTQNV GGESSGLEPA SPNAQNSDSP APNGRSSSVS SGAEGTGSEG EVFRDGSIDT
HTFGVNVEPE RSVYSNELEN SDVTTDTMTF AVNVSPVNDA PTAVDKLFTM QEDGVITFTA
EELLAGSADI DSETLHIDTV TYTGINGVLS ENMDGSFSFA PNENFNGHVD LSFTVSDSEA
TVEANIGLTI EGVNDIPVAG ATSYQVDEDH VLTFNNQQLL ANSSDVEGDV AVQSVVYSGF
EGELVDHEDG TYSFTPNENY YGELNFDVVI IDDEGTIAST TANIQIVSIN DPVIAVDDSE
LGASESLIRL DSAPEHGTLE YLNDEFEWVE MVVGEEYPAD TEVQFVANVE DVQSATCDIE
VGSFDNNTET TIFDGTARTS DWGEVSGNTA VFTKEGVTIT TETTNGDLFA WNGAGTAMGA
GIGDTSDNGL SNDDKLIVTI EGEDVNQITF QLDGLGSWFD ESDSHATEVM ITAYDAEGNV
IDSQGDYRES GDFQDEYSFT TNQPVHHFEL GTSGGGGTYV VQNMTVSRTL SEELQLVTIQ
PDGSETNSEF TLDLNYNTAG QPIDVTEELI NVDGDITSTP IQVLEDGRLI LNVSDLLAND
TDADGDPLTI VDVHTTDNSH GEVTLTEDGQ ILYTPDPNYS GEADFHYVVT DGNGSFDSAT
VTVDVIPQQD APITTGNLEL TIDEDGTITL TQEELLANAV DVDGDDLTAS NLSVGENADI
VENEDGSFTI TPDEDFNGQL DIRFDVSDGI DVVAAGIDLT VDAVNDLTVV SGDVSASTDE
DHSITITQAQ LLANAADIDG DALSVFDLVA ENAEIVSHDD GSFIITPHQD FNGMINVNYG
IHDGTDTVAS NLQLTVDPVN DAPTFTEANF VANEDGSILI TASELLQNAS DIDGDTLSIS
GISVPEDQGM VVQDENRDWL YTPNPDASGE VALTVSVSDG TVAVDFASTI SITPDADAPT
LTLSLGNASI TDFPAEDDGN VNDILAQWST DNTSGLIETN QESVYTGVDD GRGRVIELEA
HPGDESNIYQ DLDLQAGETI SLTFDYSARE GYVGEGSQID VYFDGQLIDS ITQPTVGWST
YNYELTATTD NPRLEFDAPG SDSLGGVLDK IQIVEVPVED QNIGIDISAA LTDIDGSESM
QSVLVENIPE GAMLSDGVNT FTATADENSV DVNEWAQNDV QFLPAENFSG EVNLQVSATS
VENSNGDTET TTSPLTFTVE AVADAPELVI TDGDGQVIEE GDEIRDDANI IELNLGAELV
DQDLSETLSV TVGGAPEGSV IHYDGSTIIN DQTNGLTSYA DTNITVTFEG EDAGFQNSAG
YYIVEEDGSI SGVELIYDNA SQQGSGGNLI PGSSSFSFGI EEGQSFNLFV VPNGFNHNNF
NSMQNGQFVF RDEDGSQSTM SSVDPQLIFI NEDGIETLVR SQNGDTVYHG GNSTNLNQDG
VEHTRTTMNE QGELVYGIED LYGGGDRDYD DFTFTIDLGE VNQSIYSGEI PVIGDDPIVI
PTVILDQVLT LELPEGFNDE FDLIIEATST EESNQDSATT TQTIHIDAIE YAPEVTPISA
VIDEDSSITL TQDELLANAT DINGDDLIAT NLVVTNGGAT VVLNEDGSYT ITPDENVNGA
LEVSFDVNDG LHTVATELQL AVTPINDAPI APTIVVSESE DDVLLIDPNF ILSQASDIDN
VDLILESISI RSPAQASLTQ NQEGLYQVVV PEHFNGPIDI AYVVSDGELS TEGTVNVNII
PVDDAPFQSG NAHVATDEDG AITFNSADLI DLFGDVDSAL TVSRVITAEG EEAEGTVIDN
EDGTWTFTPT DDFAGTTGLQ VVVTDGSTEV SMDMNVYIRP VADGVAITTS FDGPLVFPED
STGHFGLNIE QLDTSEIMTS VVMTGYPVGF VVSDGEHTVT ITEEGQGVDI GDWNLDSMTM
VPPADFNGNF FVTVSVVSLD EVEDPADNPI TQELGSNHSD ESPFELDDDG YALLLSADLL
NSLDNNNAEN VISDVIYSGD NGTLIDNDNG TWSFWTNPDY DGEVNVNFST SDGVSHHVIL
TQDSVESDSA PITQTNIAEP QGAQTEPETE ADYTVAPGDT LNIDIPTEIS ENADVDHIHI
IGLPDGVEPT QGLSDGEGNY VISDTSQPIT LSIDESVSGD VRVEMMGMTA MDDPIDGAVG
FSLIDVDSSY EMQGSSADNA DASVQGGDDS SGQDWTTADN TDVGVDVMDD SSSFDSATQE
TTADDDLSML NDN
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