| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0053 |
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| Symbol | |
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| ID | 6961540 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | - |
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| Start bp | 68853 |
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| End bp | 71309 |
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| Gene Length | 2457 bp |
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| Protein Length | 818 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 643381382 |
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| Product | membrane associated response regulator,histidine kinase |
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| Protein accession | YP_002264424 |
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| Protein GI | 209808886 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.255701 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACGTT TAGCTTCTTT TTCAATTCAA TTGCTATTAC AGACCGCTGG GGCAGTAATC
ACGGCGCTTT TATTATTGTA TTTCTATATG AATGTTCAGT TCCATGAGCA CGAAGAGCGA
CTCACTGAGC TGCAACTCGA AATTAAATTA GCTAAAAATG ACATGTTAAT GTTGCGTCGT
AATGAAAAAG ATTTTATGAG TAGAAATGAA ATCAAATATC ACGATCGTCT AGAAGTAGGA
ATTAAAAGCT TTAAAGGCAA ACTCATTAAT ATTCATCGAG TATTAGTGGT TGAGGGGATA
GATATTAACT CTGACAGCTT AGGCTTAATT CAATCAATTG ATGAATACGG GCATTCTTTC
CATGAGTTAA GTGAGTTATT AGAGGCGCTT AATGGAAAGA ACGGAGATAA AGGACTATTT
GAAAATCTGA AAGATGAATC TATCCAATTA GAAAGAGATT TATTGGTACT TCATAATGTT
GAATTGAATC AAATGATGTT GGTGCTACAA GAGAAGATTT ATGATTTTTA TTCTGGAATA
TCAGGAAAAG AAGAAGCGGC TGTTTTGTTT GATCTTGAAC AGATTTTTCT ATTGCTTAAT
GTTATGGAAG AAGAAGTGGC CCGTTTTGAT AATGAAACGG TAAATGATAC TTACCTGATT
TTTAAAAATA GCTTTATTAA TATTCAAAAA CTGCACAGCA TTGCTGGTTA TAATTATCGT
TTAGGGCTGT ATGGAGAAAT ACGAGCGACT ATCCATGATG TAGAAGAACG CCTTAATGTA
CTGTTTGATA CAGTATCTGT AAAAGCGACA AATAAAATTG AGCGTTTCTT CTTTTATAGC
CAAGTGCTTT CAGTGGTTAT TTTCTTACTT ATTGTTAGTG TACTTATTGC TGTTGTCGTG
ATGACTTCTC GTTTAGAAAA GCGAATCTTG CGTTCACAGA ATCAAGAGAT AAAAGCTAAC
AAAGCTAAAA GTTCATTTCT TGCCAATATG TCTCATGAGA TCCGAACTCC ACTTAATGGG
ATTATTGGGA TGACTGAAAT ATTATCAGTA TCCACATTAA CGGCCATTCA AAAAGATTAC
TTAGCGACTA TCAATGCTTC ATCCCAAACC TTATTAATGC TCATTAATGA CGTGCTTGAT
CTATCTAAAA TCGAATCAGG AAATATAGAA GTAAATACAC ATAGTTGTAA GATTAAAGAA
GTTATTTTTG ATACTGCGGC ATTGATTGCC CCGAAAGCAC AGCAAAAAGG GGTTAACATT
AAAATTATCA TGAGTGAAAA TTTTCCCACT TATGTAAAAG CCGATGAGCA AAAAATCAGA
CAAGTACTCA TGAATTTAGC TTCTAATGCG ATTAAATTTA CAGAGGCTGG CTCTATCTCT
TTTGAATTGT CATTAATTGA AGAAACAGAC ACGTCTTATC GTTATTTCTT TTCTGTAAAA
GATACTGGTC TAGGGATTGA AGAGAGTAAA CATGAGCAGG TGTTTGAAGA ATTTAAGCAA
GAAGACGATG ATACATCAAA GAACTACGGA GGGACTGGAT TAGGTTTGGC TATTTCGTCG
AAAATGATCA AAATGATGGG CAATGAAATT AAGTTAAAAT CCAGTAAAGG GGTTGGTAGT
GAGTTTTATT TTTCACTTGA ATTAGATAAA GATCATACTC CAGAGAAGGC ATCAAAAAGT
AGAAAAAATA AAACCATTAT TTATTGTTCA AAATCACCCA AGGAGTTGTT CATTAACGAA
GTGAGCGGGT ATGGGTATCA TGTTGAGAAA GTGTATTCCA TTGAAGAGAT TAAAGTTCAA
GAAACTTCAG ATTCTTTGGT TGTGCTAGAA AAAGAAGATT TCCAAGACAA AATTGATGTC
GTTAAAGAAA AGTACCCAAG ATTGCCTATC ATACTTGTTC GGAATAACAC CGATAACAAT
GCAGAAGTAG ACAGTGTGAG TGGTTATGTG ACGTATCCAT TATTAGGTTC TCGTTTAGAT
AATTTGCTGC ATTCTGTTTT TGAGCATTCA CATGAAAATG AAACTACAGA GGTTGAAGCA
AAAGAAGGGG AAATCGAGCG TGGCAATGGT ATGGTTCTTA TCGTAGAAGA TAACAAGATT
AATCAGCAAG TTGTCTCGAT TAACCTTAAA ATGTTGGGCA TAGAATATAA AATTGCGAAC
AATGGTGCAG AAGCGGTTGA ATTATATAAA AGACATCATG AAGAGATTCT CGTGGTATTA
ATGGATTGCA TGATGCCGGT TATGGATGGT TTTGAAGCAA CAAAAGCGAT TCGACAGCTA
GAAAAAAATG AAGATATAAC GCTTACGACG ATTATTGCGC TTACGGCCTC TATATTGGAC
GATGACATTC AGAAATGTTT TGATAGTGGT ATGGATGATT ATTTACCGAA ACCATTCAGA
AGAGAGATCC TCCAAGAAAA AATAGCGAAA CTTCAGTTAA TCTATAAAAA ACGATGA
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| Protein sequence | MKRLASFSIQ LLLQTAGAVI TALLLLYFYM NVQFHEHEER LTELQLEIKL AKNDMLMLRR
NEKDFMSRNE IKYHDRLEVG IKSFKGKLIN IHRVLVVEGI DINSDSLGLI QSIDEYGHSF
HELSELLEAL NGKNGDKGLF ENLKDESIQL ERDLLVLHNV ELNQMMLVLQ EKIYDFYSGI
SGKEEAAVLF DLEQIFLLLN VMEEEVARFD NETVNDTYLI FKNSFINIQK LHSIAGYNYR
LGLYGEIRAT IHDVEERLNV LFDTVSVKAT NKIERFFFYS QVLSVVIFLL IVSVLIAVVV
MTSRLEKRIL RSQNQEIKAN KAKSSFLANM SHEIRTPLNG IIGMTEILSV STLTAIQKDY
LATINASSQT LLMLINDVLD LSKIESGNIE VNTHSCKIKE VIFDTAALIA PKAQQKGVNI
KIIMSENFPT YVKADEQKIR QVLMNLASNA IKFTEAGSIS FELSLIEETD TSYRYFFSVK
DTGLGIEESK HEQVFEEFKQ EDDDTSKNYG GTGLGLAISS KMIKMMGNEI KLKSSKGVGS
EFYFSLELDK DHTPEKASKS RKNKTIIYCS KSPKELFINE VSGYGYHVEK VYSIEEIKVQ
ETSDSLVVLE KEDFQDKIDV VKEKYPRLPI ILVRNNTDNN AEVDSVSGYV TYPLLGSRLD
NLLHSVFEHS HENETTEVEA KEGEIERGNG MVLIVEDNKI NQQVVSINLK MLGIEYKIAN
NGAEAVELYK RHHEEILVVL MDCMMPVMDG FEATKAIRQL EKNEDITLTT IIALTASILD
DDIQKCFDSG MDDYLPKPFR REILQEKIAK LQLIYKKR
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