| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0052 |
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| Symbol | |
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| ID | 6962416 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | - |
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| Start bp | 67915 |
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| End bp | 68814 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 643381381 |
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| Product | response regulator protein |
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| Protein accession | YP_002264423 |
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| Protein GI | 209808885 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.189873 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAAGCG AACAAAAAAT AGTAATTGTT GAAGATGATC CAGTCAGTCG TCAGGTATTG
CATCATCTAT TAAAGCCGTT ACCGTCCATT TTAACTCAAA ATGGGGCTGA AGCTCTTGAT
GTTATTTTGA ATGAAAGTAT TGATTTGGTC TTACTTGATA TTCATATGCC AGTGATGGGG
GGCTTTGAAG TCATTGAAAG ACTAAAAAAT GACGATAAAA CAAAAGATAT CCCTATCATC
GTTATTACGG TGAATCATTC AAAAGAAGAT GAAATTCGAG CATTAGATTT GGGTGCTGTT
GATTTTATTA CCAAACCGTT TAATGCGGTT ATCTTGCAGA AACGTGTACG TAATCAGTTA
GCTTTAAAAT TGAAATCCGA TTTACTTGAA AAGCACGCGT CATTAGATGG ATTAACGAAT
CTTTTAAACC GCCGCATGTT TGATTTTGAT TTAGAAAGTA AGTGGGCAGA AGGACGCAGG
TTGAAGACCA ACGTTGGGCT TATCATGTTC GATATTGATC ACTTCAAACT TTATAATGAT
AATTATGGTC ATTCGGCAGG TGATGATGTA CTCGTGCGTG TATCTAGAGC TCTAATGGGA
GCTCTACAAA GAAAAACTGA CAGAGTGTAT CGATATGGCG GTGAAGAGTT TACTTTAATT
CAGTTCGATA CCGATGTTGA ACAATTAAAT CAAACCGCAG AATTATTAAG AGAATGTGTT
TATAACTTGA ACATTACTCA TGAGCACTCT TCTTATGGCA AAGTAAGTAT TAGTGTTGGG
GTGGCCTTAA TCGAAAATGA TAATGATCAG TCAGAGTATT CATTATTATT GGCTGCAGAT
GAACAGTTAT ACAAAGCTAA AGATAGAGGA CGTAACTGTA TCGCATCAAT AACGGTATGA
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| Protein sequence | MLSEQKIVIV EDDPVSRQVL HHLLKPLPSI LTQNGAEALD VILNESIDLV LLDIHMPVMG
GFEVIERLKN DDKTKDIPII VITVNHSKED EIRALDLGAV DFITKPFNAV ILQKRVRNQL
ALKLKSDLLE KHASLDGLTN LLNRRMFDFD LESKWAEGRR LKTNVGLIMF DIDHFKLYND
NYGHSAGDDV LVRVSRALMG ALQRKTDRVY RYGGEEFTLI QFDTDVEQLN QTAELLRECV
YNLNITHEHS SYGKVSISVG VALIENDNDQ SEYSLLLAAD EQLYKAKDRG RNCIASITV
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