| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0050 |
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| Symbol | chb |
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| ID | 6961538 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | - |
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| Start bp | 63564 |
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| End bp | 66209 |
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| Gene Length | 2646 bp |
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| Protein Length | 881 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 643381376 |
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| Product | N,N'-diacetylchitobiase precursor (chitobiase) |
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| Protein accession | YP_002264421 |
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| Protein GI | 209808883 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3525] N-acetyl-beta-hexosaminidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.304506 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTAAAA AAACGCTTTT ATCGACCCTT ATCCTTGCAG GCTTAGCGGC ATGTTCATCA
ACAACGCCAG AGCAATCAAC AGTTAACCTA TTGGCTGAAA ATCTAGATGT TAACTACACA
GTTATTACTA ACCAAGGTGC TGATGACGGC CTTGCTTGTA AAGATCTTCA AGCTGAATTT
GCATCATGTA ACAAAGTAAA CATGACGCTA ACCAATACAG GTGCTGCGGT TGATTCAAGT
GATTGGACAA TCTATTTCCA CAGCATTCGT TTAATTCTAG ATGTTGAAAA TGACCAATTT
AAAATTACTC GTGTAACGGG TGACTTACAT AAACTTGAAC CAACAGATAA ATTTGATGGT
TTTGCTGCTG GTGAAGAAGT CGTTATTCCA CTGGTTGCTG AATATTGGCA GTTATTTGAA
ACTGACTTCA TGCCGGGCGC ATTCGTAACA GCACCAGGTG CAGAAGCTCG TAATATTATT
TCTTTAGATA CTGAAGACAC TGGTGAATAC GTAGATGAAA TTATCGGTGT TCAACTAAAG
CGTACACTTG CTGATAATAA CGTAACGGCA ACAGCTAATA CTCGTTTTGA GAAAAACTCA
GATGTAGCTG AAGTAGACGC GTCTTCTCAT ATTATTCCAA CACCTTTAAA AACAACGCTA
ACTAATAAAA CCGTTGATTT AGCAAAAGGT ATTTCAATTA CAGCTAACGG TATTGATGCA
GACCAACTTG CAGCATTAAA TCAACGTGCT GAACTTCTAG GCCTAGAAAC GGCGGGTGAA
TACCCAGTAT CAGTAGCGGT TGATAAGAGC CAATTTAAAG ATGGCGTATC TGGCGCATAC
ACACTAGATG TCACTGAAGG TAAAACAACG GTTGTTGCAT TTGATGAAGC GGGTGCATTC
TACGGCGTTC AATCTTTACT AGCACTAGTA AGCCTAGATA GCTCAGAAAT CCCAACACTA
AACGTGGAAG ATGCTCCTCG TTTTGAATAC CGTGGTGTAA TGGTTGATGT TGCTCGTAAC
TTCCACTCAA AAGAAGCGAT TCTTGCGACA GTTGACCAAA TGGCAGCCTA CAAACTTAAC
AAACTACACC TTCACCTAAC AGATGATGAA GGCTGGCGTT TAGAGATCCC TGGTCTTCCT
GAACTAACTG ACATCGGTAG TAATCGTTGT TTTGATGAGT CAGAAACATC ATGTCTACTA
CCTCAACTAG GTTCAGGTGC TGATTCAGAT AACTTTGGTT CTGGTTTCTT CACAACAGAA
GATTACCTAG AGATCCTAAC GTACGCTAAA AACCGTAACA TTGAAGTGAT TCCAGAAATC
GATATGCCAG CTCACTCACG TGCAGCAGTA ATGTCAATGG AAGCGCGTTA CACTCGTCTT
GCTGCTGAAG GCAAGATGGA AGAAGCAAAC GAATATCGTC TGATGGATCC AAAAGACGAA
TCAAACGTAA CAACGGTTCA GTTCTACAAC AAACAAAGTT TCATCAACCC ATGTTTAGAT
TCATCGGCAA CGTTCGTAGA TAAAGTCATC ACTGAAGTTG CTGCAATGCA CAAAGCGGCT
GGTGTTCCTT TATCAACATG GCACTTCGGT GGTGATGAAG CGAAAAACAT CAAACTTCAC
GCTGGTTTCC AAGACATCAA TGATGAAGAA AAAATCGGAT GGAAAGGTGA CTTAGACCTA
TCTAAACAAG ATTTCCCATT TGCTAAATCA CCACAATGTC AGTCTTTGAT TGCAAGCGGT
GAAGTTGCAG ATTTCGAACA CCTGCCAAGC CATTTTGCTG AGCAAGTATC GAAAATCGCA
GCTAAACAAG GCATTCCACA CTTCCAAGCA TGGCAAGATG GCTTGAAACA CTCTGAAGGC
GCTGATGCAT TTGCAACTGA ATCTGTACGT GCAAACTTCT GGGATACTCT GTACTGGGGC
GGCGGTGCTT CAGCATACGA ATGGGCAGAT AAAGGCTATG ACGTAGTTGT TTCTAGTCCT
GATTATGTTT ACATGGATTT CCCATACGAA GTTGATGCGA AAGAGCGTGG CTACTACTGG
GCAACTCGTG CAACAGATAC TCGTAAGATG TTCGGTTTCG CACCAGAAAA CCTACCTCAA
AATGCGGAAA CATCCGTTGA CCGTGACGGT AACGGCTTTG AAAGTGCGGG CACAGTAACA
CCGAAGAAAC CTTTCTACGG TTTGTCTGCG CAACTTTGGT CTGAGACAGT ACGTACTGAT
GAGCAATATG AGTACATGGT ATTCCCACGT GTCATTGCAG CAGCAGAGCG TGCATGGCAT
GAAGCGTCTT GGGAAAATGA ATACAAAGCA GGTGTTAAAT ACTCTCTAGA TACAAACCTA
GTGAACAAGA AAGCACAGCT TGCTGATTGG ACGAACTTTG CAAACACTAT GGGTCAACGT
GAATTAGCGA AGCTTGAAAG AGCGGGTATT GATTATCGTC TACCAATCCC AGGTGCAGAA
ATTGCAAACG GCGAGCTAAG CATGAACATT TCATTCCCAG GTGTAACGCT ACAATACTCT
GTAGATGGCG GTAAAACATG GGCTGCATAT GACAATGCGA ACAAACCAAA AGTAACTGGT
GATGTTCAAA TTCGTTCAGC ATCATTTACT GGCGAGCGTG TTAGCCGAGT AACTAGCGTT
AAATAA
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| Protein sequence | MFKKTLLSTL ILAGLAACSS TTPEQSTVNL LAENLDVNYT VITNQGADDG LACKDLQAEF
ASCNKVNMTL TNTGAAVDSS DWTIYFHSIR LILDVENDQF KITRVTGDLH KLEPTDKFDG
FAAGEEVVIP LVAEYWQLFE TDFMPGAFVT APGAEARNII SLDTEDTGEY VDEIIGVQLK
RTLADNNVTA TANTRFEKNS DVAEVDASSH IIPTPLKTTL TNKTVDLAKG ISITANGIDA
DQLAALNQRA ELLGLETAGE YPVSVAVDKS QFKDGVSGAY TLDVTEGKTT VVAFDEAGAF
YGVQSLLALV SLDSSEIPTL NVEDAPRFEY RGVMVDVARN FHSKEAILAT VDQMAAYKLN
KLHLHLTDDE GWRLEIPGLP ELTDIGSNRC FDESETSCLL PQLGSGADSD NFGSGFFTTE
DYLEILTYAK NRNIEVIPEI DMPAHSRAAV MSMEARYTRL AAEGKMEEAN EYRLMDPKDE
SNVTTVQFYN KQSFINPCLD SSATFVDKVI TEVAAMHKAA GVPLSTWHFG GDEAKNIKLH
AGFQDINDEE KIGWKGDLDL SKQDFPFAKS PQCQSLIASG EVADFEHLPS HFAEQVSKIA
AKQGIPHFQA WQDGLKHSEG ADAFATESVR ANFWDTLYWG GGASAYEWAD KGYDVVVSSP
DYVYMDFPYE VDAKERGYYW ATRATDTRKM FGFAPENLPQ NAETSVDRDG NGFESAGTVT
PKKPFYGLSA QLWSETVRTD EQYEYMVFPR VIAAAERAWH EASWENEYKA GVKYSLDTNL
VNKKAQLADW TNFANTMGQR ELAKLERAGI DYRLPIPGAE IANGELSMNI SFPGVTLQYS
VDGGKTWAAY DNANKPKVTG DVQIRSASFT GERVSRVTSV K
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