Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I3065 |
Symbol | atpB |
ID | 6988281 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 3319447 |
End bp | 3320259 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 643381334 |
Product | F0F1 ATP synthase subunit A |
Protein accession | YP_002264380 |
Protein GI | 209696449 |
COG category | [C] Energy production and conversion |
COG ID | [COG0356] F0F1-type ATP synthase, subunit a |
TIGRFAM ID | [TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGCGC CAGGCGAAGC GCTAACACAA TCTGGATATA TTGAGCATCA CCTATCAAAC CTGTCTCTTG CGAAACTAGG TATGGTTGCT GATGAAACAA GCTTCTGGAA CGTACATATC GATAGCCTGT TCTTTTCTGT GCTTACAGGG ATGTTATTCC TTTGGGTTTT TCGTTCTGTA GCAAAGAAAG CAACAACAGG AGTACCAGGA AAGCTACAAT GTTTTGTTGA AATGGTCGTG GAATTCGTTG CTGACAACGT TAAAGAAACT TTCCATGGAC GCAATCCATT AGTTGCTCCA CTGGCACTAA CTATCTTCTG CTGGGTTATT TTAATGAACT TGATGGATTT AATTCCAATC GATTTCTTAC CATACTCTGC AGCGCATTGG TTAGGTATCC CTTATCTTAA GGTGGTTCCT TCTGCTGATG TGAATATCAC CATGGCAATG GCGTTAGGTG TTTTTGCGTT GATGATCTAT TACAGCATCA AGGTTAAAGG ACTTGGCGGG TTTGCTAAAG AATTAGCACT TCACCCGTTT AATCACCCAA TCATGATTCC ATTCAACCTA TTATTGGAAG TTATTTCGTT ATTAGCGAAG CCTCTTTCTT TAGGTATGCG CTTGTTTGGT AATATGTTTG CTGGTGAGGT GGTGTTTATT CTTATTGCGG CAATGCTACC GTGGTATTTA CAATGGGTAG GTGCACTACC TTGGGCTATC TTCCACATTT TAGTTATTTT GATTCAGGCG TTCGTATTCA TGATGTTGAC AATCGTTTAT CTGTCAATGG CTCATGAAGA TCCTGATCAT TAA
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Protein sequence | MAAPGEALTQ SGYIEHHLSN LSLAKLGMVA DETSFWNVHI DSLFFSVLTG MLFLWVFRSV AKKATTGVPG KLQCFVEMVV EFVADNVKET FHGRNPLVAP LALTIFCWVI LMNLMDLIPI DFLPYSAAHW LGIPYLKVVP SADVNITMAM ALGVFALMIY YSIKVKGLGG FAKELALHPF NHPIMIPFNL LLEVISLLAK PLSLGMRLFG NMFAGEVVFI LIAAMLPWYL QWVGALPWAI FHILVILIQA FVFMMLTIVY LSMAHEDPDH
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