Gene VSAL_I3063 details

Gene Information

• Locus tag: VSAL_I3063
• Symbol: atpF
• ID: 6988284
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aliivibrio salmonicida LFI1238
• Kingdom: Bacteria
• Replicon accession: NC_011312
• Strand: -
• Start bp: 3318604
• End bp: 3319074
• Gene Length: 471 bp
• Protein Length: 156 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 643381332
• Product: F0F1 ATP synthase subunit B
• Protein accession: YP_002264378
• Protein GI: 209696447
• COG category: [C] Energy production and conversion
• COG ID: [COG0711] F0F1-type ATP synthase, subunit b
• TIGRFAM ID: [TIGR01144] ATP synthase, F0 subunit b

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGAATATGA ACGCAACTCT GCTTGGTCAA GCAATCGCTT TTGCTCTGTT TGTTTGGTTC 
TGCATGAAAT ATGTATGGCC ACCAATCATG GAAGCGATAG AGGAACGTCA GAAGAAAATT 
GCTGACGGTT TATCTGCCGC TGAACGCGCA GCTAAAGACC TTGACTTGGC ACAAGCGAAT 
GCTTCTGATC AATTGAAAGA AGCAAAGCGC GCTGCAACTG AGATCATCGA ACAAGCAAAT 
AAGCGTAAAG GTCAAATTTT AGATGAAGCT CGTGAAGAAG CTCTGACAGA ACGTCAGAAT 
ATTCTTACTC AAGGTGAAGC TGAACTTGAA ACTGAACGCA ACCGTGCTCG CGATGAACTG 
CGTAAACAAG TTGCAACTCT GGCTGTGATT GGTGCTGAGA AAATCTTGGA GCGTTCTATT 
AATTTAGAAG CGCAGAAAGA TATTCTTGAT AACATCACTG CGAAATTGTA A 

 

Protein sequence

MNMNATLLGQ AIAFALFVWF CMKYVWPPIM EAIEERQKKI ADGLSAAERA AKDLDLAQAN 
ASDQLKEAKR AATEIIEQAN KRKGQILDEA REEALTERQN ILTQGEAELE TERNRARDEL 
RKQVATLAVI GAEKILERSI NLEAQKDILD NITAKL