Gene VSAL_I3062 details

Gene Information

• Locus tag: VSAL_I3062
• Symbol: atpH
• ID: 6988277
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aliivibrio salmonicida LFI1238
• Kingdom: Bacteria
• Replicon accession: NC_011312
• Strand: -
• Start bp: 3318053
• End bp: 3318586
• Gene Length: 534 bp
• Protein Length: 177 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 643381331
• Product: F0F1 ATP synthase subunit delta
• Protein accession: YP_002264377
• Protein GI: 209696446
• COG category: [C] Energy production and conversion
• COG ID: [COG0712] F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein)
• TIGRFAM ID: [TIGR01145] ATP synthase, F1 delta subunit

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCGACAA TGACAACCAT CGCACGCCCC TACGCGAAAG CAGCTTTTGA CTTTGCGGTC 
GAAAAGAACG AATTGAACCA ATGGGTTCAA ATGTTAACTT TTTGTTCAGA AGTTACAAAA 
AATAAAGACA TGGCTCAATT GCTAGATGGT GCAGTCGCAC CAGAAAAATT AGCGGAAATC 
TTTATTTCTA TTTGTGGCGA ACAACTGAAC GAGTTTGGAC AGAATCTGAT TCACATAATG 
GCTGAAAACG GTCGTTTAAA GGTTCTACCT GATGTGTTAG ATCAATATAT CCTTTTACAA 
CATGAGTTTG AAAAAGTGAT TGATGCTGAA ATTATTTCGG CAATTGAACT AACTGAACAG 
CAAAAAGCTG ACATTGGCGC CAAACTTGAA GCTCGTTTAG AGCGCAAAGT GAAGCTGAAT 
TGTAGCGTAG ATGAGGCCCT GTTAGCTGGG GTCATAATTC GAGCCGGAGA CCTAGTCATT 
GATAACTCAG TTAGAGGCCG TTTGAGCCGA CTGAGTGAAA CATTGCAGTC TTGA 

 

Protein sequence

MSTMTTIARP YAKAAFDFAV EKNELNQWVQ MLTFCSEVTK NKDMAQLLDG AVAPEKLAEI 
FISICGEQLN EFGQNLIHIM AENGRLKVLP DVLDQYILLQ HEFEKVIDAE IISAIELTEQ 
QKADIGAKLE ARLERKVKLN CSVDEALLAG VIIRAGDLVI DNSVRGRLSR LSETLQS