| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I3061 |
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| Symbol | atpA |
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| ID | 6988283 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 3316498 |
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| End bp | 3318039 |
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| Gene Length | 1542 bp |
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| Protein Length | 513 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 643381330 |
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| Product | F0F1 ATP synthase subunit alpha |
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| Protein accession | YP_002264376 |
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| Protein GI | 209696445 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0056] F0F1-type ATP synthase, alpha subunit |
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| TIGRFAM ID | [TIGR00962] proton translocating ATP synthase, F1 alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACTTA ATTCCACGGA AATTAGCGAT CTGATCAAAC AACGTATTGA AAAATTCAAC
GTTGCAAGTG AAGCTCGTAA TGAAGGTACA ATCGTTTCTG TAAGCGACGG TATTATTCGT
ATCCACGGCC TTGCTGATGT TATGCAAGGC GAAATGATTG AATTACCTGG TGGCCATTAC
GCACTAGCAC TTAACCTTGA GCGTGACTCA GTGGGTGCTG TTGTTATGGG ACCTTATGCT
GACTTACAAG AAGGCATGAA AGTTACAGGT ACTGGTCGTA TCCTTGAAGT ACCAGTAGGC
CCAGAAATGT TAGGTCGTGT TGTAAACACA CTTGGCGAGC CTATTGATGG TAAAGGACCT
ATTGACGCGA AATTAACTTC TCCAGTAGAA GTGATTGCAC CTGGTGTAAT CGATCGTAAA
TCAGTAGACC AACCACTACA AACTGGCTAT AAGTCAGTTG ACTCAATGAT CCCAATCGGC
CGAGGTCAGC GTGAGCTAAT CATCGGTGAC CGTCAGACTG GTAAAACAGC AATGGCGATC
GATGCGATCA TTAACCAGAA AAATTCTGGT ATCTTCGCTA TTTATGTTGC AATTGGCCAA
AAGGCATCAA CAATTGCTAA CGTAGTTCGT AAACTGGAAG AGCATGGTGC ACTAGCGAAT
ACTATCGTTG TTGTTGCTTC TGCTTCTGAA TCTGCTGCGC TGCAATATCT TGCACCGTAT
GCTGGTTGTG CGATGGGTGA ATACTTCCGT GATCGCGGTG AAGATGCTCT GATTGTTTAT
GATGATCTAT CTAAGCAAGC AGTAGCTTAT CGTCAGATTT CTCTACTATT GAAACGTCCA
CCGGGCCGTG AAGCGTTCCC TGGCGATGTA TTCTATTTAC ACTCCCGTCT ACTAGAGCGT
GCTGCTCGTG TAAGCGTAGC GTACGTTGAG AAATTCACCA ATGGTGAAGT GAAAGGTAAA
ACTGGTTCTT TGACTGCTCT ACCTATCATC GAAACTCAAG CTGGTGATGT ATCTGCATTT
GTACCAACTA ACGTAATTTC GATTACTGAT GGTCAGATCT TCCTACAAAC AGAACTGTTC
ACCGCTGGTG TTCGTCCTGC TGTAGATCCA GGTATCTCTG TATCTCGTGT TGGTGGTGCT
GCGCAAACTA AGATCATTAA GAAACTGTCT GGTGGTATTC GTACTGCTCT TGCACAGTAT
CGTGAACTTG CAGCATTTGC TCAGTTCTCT TCTGATCTTG ATGAAGCGAC TAAAAAGCAA
CTTGATCATG GTGAGAAAGT AACTGAGCTT ATGAAACAAA AACAGTACGC TCCAATGTCT
GTTTTTGATC AAGCATTAGT TATCTTTACA GCTGAGAAAG GCTACTTGAA TGATGTTGAG
CTTAAGAAGC TTGCTGATTT TGAAGAAGCT CTGCTGTCGT ATGCTCGTGG TCAATTTGCC
GATCTAGCAA AAGAGATCGA CTCATCGGGT GCTTGGAATA AAGAAATTGA AGATCAGTTC
GTGAAACTGG TTGAAGATTT CAAAGCAACC CAGACCTGGT AA
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| Protein sequence | MQLNSTEISD LIKQRIEKFN VASEARNEGT IVSVSDGIIR IHGLADVMQG EMIELPGGHY
ALALNLERDS VGAVVMGPYA DLQEGMKVTG TGRILEVPVG PEMLGRVVNT LGEPIDGKGP
IDAKLTSPVE VIAPGVIDRK SVDQPLQTGY KSVDSMIPIG RGQRELIIGD RQTGKTAMAI
DAIINQKNSG IFAIYVAIGQ KASTIANVVR KLEEHGALAN TIVVVASASE SAALQYLAPY
AGCAMGEYFR DRGEDALIVY DDLSKQAVAY RQISLLLKRP PGREAFPGDV FYLHSRLLER
AARVSVAYVE KFTNGEVKGK TGSLTALPII ETQAGDVSAF VPTNVISITD GQIFLQTELF
TAGVRPAVDP GISVSRVGGA AQTKIIKKLS GGIRTALAQY RELAAFAQFS SDLDEATKKQ
LDHGEKVTEL MKQKQYAPMS VFDQALVIFT AEKGYLNDVE LKKLADFEEA LLSYARGQFA
DLAKEIDSSG AWNKEIEDQF VKLVEDFKAT QTW
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