| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I3049 |
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| Symbol | gne |
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| ID | 6988053 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 3303337 |
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| End bp | 3304344 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 643381320 |
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| Product | uridine diphosphate N-acetylgalactosamine 4-epimerase |
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| Protein accession | YP_002264366 |
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| Protein GI | 209696435 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1087] UDP-glucose 4-epimerase |
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| TIGRFAM ID | [TIGR01179] UDP-glucose-4-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.200753 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATATTT TAGTCACTGG CGGAATGGGT TACATCGGTA GCCATACCTG CGTACAAATG
ATTGAAGCGG GCTTAACGCC GATCATTTTA GACAACTTAT ACAACAGTAA AGAAGTGGTG
CTTGATCGCA TTGAAGCTTT GGTTGGTGTA AAACCTAAAT TTTATGAGGG TGACATTCGT
GATCCTCAAA TCTTAGCGAC TGTCTTTGCT GAAAACCAAA TCGATAGTGT GATCCACTTT
GCTGGCTTAA AAGCAGTCGG TGAGTCGGTT GAAAAACCAA TCATGTATTA CGATAACAAT
GTATCGGGTA CTTTGGTTTT AGTTGAAGCG ATGCGTAAAG CGGGTGTGAA CAGCATTGTA
TTTAGTTCAT CAGCGACGGT TTATGGTGAT CCGGCGTCTA CCCCAATTAA TGAAAACTTC
CCAAAATCAG CAACCAATCC TTATGGTCGC AGTAAGCTGA TTGTTGAAGA GTGTCTAACT
GATATTCAAA AAGCACACCC TGAGATGAGT GTGACGCTAT TACGTTACTT TAATCCGGTT
GGTTCTCATA AATCAGGCAC CATGGGTGAA GATCCTCAAG GTATTCCAAA CAACTTGATG
CCGTTTATCT CTCAAGTTGC TGTTGGCCGT CGTGAATTTT TATCGGTATT TGGTGATGAT
TATCCTACAG TAGATGGTAC GGGTGTTCGT GATTATATCC ATGTGGTGGA TTTAGCTGAT
GGTCACTTAG CGGCGTTAAA GCACAAAGGC CAACAAGCGG GTTTGCATAT TTATAACTTG
GGTACTGGTA ATGGTAACAG TGTTCTTCAA ATGGTCGCTG CGTTTGAGAA AGCTTCTGGC
GCTAAAGTTC CGTATCAAAT AGTCCCTCGC CGCCCTGGTG ATATTGCCGA GTGTTGGGCT
GACCCTGCTA AAGCGCGTGA AGAGTTGAAG TGGGAAGCGA AATTGTCTCT TGATGATATG
ACGGCGGATA CGTGGCGCTG GCAGTCGAAT AATCCGAAAG GATACTAG
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| Protein sequence | MNILVTGGMG YIGSHTCVQM IEAGLTPIIL DNLYNSKEVV LDRIEALVGV KPKFYEGDIR
DPQILATVFA ENQIDSVIHF AGLKAVGESV EKPIMYYDNN VSGTLVLVEA MRKAGVNSIV
FSSSATVYGD PASTPINENF PKSATNPYGR SKLIVEECLT DIQKAHPEMS VTLLRYFNPV
GSHKSGTMGE DPQGIPNNLM PFISQVAVGR REFLSVFGDD YPTVDGTGVR DYIHVVDLAD
GHLAALKHKG QQAGLHIYNL GTGNGNSVLQ MVAAFEKASG AKVPYQIVPR RPGDIAECWA
DPAKAREELK WEAKLSLDDM TADTWRWQSN NPKGY
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