Gene VSAL_I3032 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I3032 
Symbol 
ID6988036 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand
Start bp3282275 
End bp3282823 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content39% 
IMG OID643381307 
Productgalactosyl transferase, capsular polysaccharide synthesis enzyme 
Protein accessionYP_002264353 
Protein GI209696422 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2148] Sugar transferases involved in lipopolysaccharide synthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATACGTA TTATCGATTT CTTCGCAGCC TTTTTCGGTT TGCTTTTCTT ATGGCCAGTT 
CTGCTTATCG TAACTATTAT TGGCTTGTTT GATACCGGTT CCCCAATCTT CATTCAAGAA
CGAGTAGGGC GTAATAAAAA GCCGTTTAAA CTTATTAAGT TTCGCACTAT GTCTGTTGAA
ACTAAATCGG TAGCTAGCCA CTTAGCAAAT AATGCATCAA TCACAAAGCT TGGTAATTTT
TTGCGCAAGA CCAAAATTGA TGAGTTGCCT CAGCTCATCA ACGTGGTGAA AGGTGAAATG
AGCTTGGTTG GCCCTCGTCC AAACTTATTT AACCAAGACG ATCTAATTAA AGAGCGTGAT
GCATTAGGGG TATATGATGT ACTTCCCGGT GTAACAGGTT TAGCTCAAGT TCAAAATATC
GATATGTCTA CACCACAATT GTTAGCTAAA ACTGACAAGC AGATGATTGA TACGTTAACC
ATTAAAGATT ACTTTAAATA CATCATCATG ACAGCGACAG GCAGTGGCTC GGGTGATGCG
GTAAAATAA
 
Protein sequence
MIRIIDFFAA FFGLLFLWPV LLIVTIIGLF DTGSPIFIQE RVGRNKKPFK LIKFRTMSVE 
TKSVASHLAN NASITKLGNF LRKTKIDELP QLINVVKGEM SLVGPRPNLF NQDDLIKERD
ALGVYDVLPG VTGLAQVQNI DMSTPQLLAK TDKQMIDTLT IKDYFKYIIM TATGSGSGDA
VK