| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I3029 |
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| Symbol | |
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| ID | 6989415 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 3279138 |
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| End bp | 3280274 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 643381304 |
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| Product | putative NAD dependent epimerase/dehydratase |
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| Protein accession | YP_002264350 |
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| Protein GI | 209696419 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTAAGA ATGTATTAAT CACAGGTGGT GCAGGCTTTA TTGGCTCAAA TTTGGCGCTG
GATTTAATAG ATAAAGGCTG TAATGTCACA GTACTTGATA ATTTATCACC GCAGATACAT
GGAGAAAATC CTGAATTATC ACCTTTGTAT TGTTCAATAA AAGGTAAAGT TCGATTTATT
CAAGGTACTG TGGAATCTCG TGACGACTGG CTAGAAGCAT TGAAAGATAT TGATACTGTT
GTTCATTTAG CGGCAGAGAC CGGAACTGGA CAGTCGATGT ACCAAATAAA AAAATATTCA
GATATCAATA TTGGTGGTAG CGCGATATTT TTAGATTTAC TTGCTAATGA ACCACATAAC
ATCACTAAGA TGGTAATTGC CTCTTCACGA TCTATTTACG GGGAAGGTAA GTATTTATGT
TCAGAACACG GCATTGTGTA TCCTAACGCC CGCAATGATG AAGATATGAA GCATGATGAT
TTTAATGTTA AGTGCCCTTT ATGCTCCATT AATGTTGAAT TGCTTGCTAC TGATGAAGAA
AGCAAAATAC ATCCTTCTTC TATTTATGGT GTAACGAAAC AAGTTCAAGA ACAAATGTTT
ATGATCACAG GGGAAAGTTT AGATATTCCT ACCGTGTCAT TAAGATTTCA AAATGTATAT
GGCGCTGGTC AGTCATTATC TAATCCATAC ACAGGTATCT TATCTATTTT TTCAACGAGA
ATTAAAAATG GTAATGATAT CAATATATTT GAAGATGGTT TGGAAAGTCG TGATTTTGTT
TATATCGATG ATGTAGTCGA TTCTATTGTA CTCTCTATTT TCAATGAGAA TGCAAATTAT
CAAATCTTTA ATGTTGGTTC TGGGGTCTGT ACAGACGTAT TGAGCGTTGC AGAGACATTG
AAGAGTGTTT ATGAGTCTAG TTCTAATATA CTGATTAGTA GCAATTATCG TGTTGGAGAT
ATTCGACATA ATTTTGCCGA TCTTACTTTA ATTAAATCGA AAATCGGATT TGAACCTAAA
GTTGATTTTG TTAGTGGTAT GCGAAAATTT ACTGCTTGGG TTAATCAACA AGAAGTTCAA
GCTGACTTGT ATGAAAGCTC CATTGCTGAA ATGAAGTCAA AAGGCTTGTA TAAATAA
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| Protein sequence | MTKNVLITGG AGFIGSNLAL DLIDKGCNVT VLDNLSPQIH GENPELSPLY CSIKGKVRFI
QGTVESRDDW LEALKDIDTV VHLAAETGTG QSMYQIKKYS DINIGGSAIF LDLLANEPHN
ITKMVIASSR SIYGEGKYLC SEHGIVYPNA RNDEDMKHDD FNVKCPLCSI NVELLATDEE
SKIHPSSIYG VTKQVQEQMF MITGESLDIP TVSLRFQNVY GAGQSLSNPY TGILSIFSTR
IKNGNDINIF EDGLESRDFV YIDDVVDSIV LSIFNENANY QIFNVGSGVC TDVLSVAETL
KSVYESSSNI LISSNYRVGD IRHNFADLTL IKSKIGFEPK VDFVSGMRKF TAWVNQQEVQ
ADLYESSIAE MKSKGLYK
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