| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I3000 |
|---|
| Symbol | tatB |
|---|
| ID | 6989273 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aliivibrio salmonicida LFI1238 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011312 |
|---|
| Strand | + |
|---|
| Start bp | 3249822 |
|---|
| End bp | 3250199 |
|---|
| Gene Length | 378 bp |
|---|
| Protein Length | 125 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 643381277 |
|---|
| Product | sec-independent translocase |
|---|
| Protein accession | YP_002264325 |
|---|
| Protein GI | 209696394 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1826] Sec-independent protein secretion pathway components |
|---|
| TIGRFAM ID | [TIGR01410] twin arginine-targeting protein translocase TatB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTTTGATA TCGGTTTTTG GGAACTGATA CTGATCTCTG TTGTTGGGCT AGTGGTACTA
GGACCGGAAC GTTTACCAAA AGCGATCCGA TCAGTAGCGC AGTTTGTTGG GGCAGCAAAA
AGCATGGCGA ATAACGTCAA AGATGAGCTG ACTCAAGAAT TGAAGATTCA AGAACTTCAA
GATAACTTGC GTAAAGCAGA ACAGATGAAT ATGGATGACT TATCGCCTGA ACTTAAAAAA
TCAGTTGAAG AGTTAAAACA AGCGGCAGCA GATGTCACTC GTCCATATGC AAAACCAGAA
GAAAAAGTAG AAGCACCGAG TGCAGACACT GAAACTTCCG TTGTATCTGA CTCTACCTCT
AAAACAAAAG CAGAGTAA
|
|---|
| Protein sequence | MFDIGFWELI LISVVGLVVL GPERLPKAIR SVAQFVGAAK SMANNVKDEL TQELKIQELQ
DNLRKAEQMN MDDLSPELKK SVEELKQAAA DVTRPYAKPE EKVEAPSADT ETSVVSDSTS
KTKAE
|
|---|
| |