Gene VSAL_I2997 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I2997 
Symbol 
ID6989351 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand+ 
Start bp3247263 
End bp3247886 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content41% 
IMG OID643381274 
Producthypothetical protein 
Protein accessionYP_002264322 
Protein GI209696391 
COG category[S] Function unknown 
COG ID[COG3165] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCATTAG ATCCGTTTGT AACAGGTGTG ATTGAAACGG GGTTAAACGC CCTGCTAAAA 
GAATCGCCAG AGAGCAAAGC TGCATTGCAT CGATTAAAAG AGAAGATTAT TCATGTTCAT 
TTGAATGAGT TTAATAAAGA TCTCTATTTT ATTTTTAGCC AACAGCACGT TGATATCTTG 
TCTAAATTTG AAGGTGAGGT TGATTGTTAT CTTGCGTTGA ATTTGTCGGT GTTGCCGCAA 
TTGCGAGAGC AAAACAATAT TACTCAATTA ATAAAGCAAG ATAAGTTAGT GCTTGAAGGT 
GATCTTAACC TCGCTCAGCA ATTCTCTGCA TTATTAACAG AATTAAAACC GGATGTTGAA 
GAGAAATTGT CTCAATATAC GGGAGACATT GTTGCGCATA CATTGGTGAG TGGCGTTAAA 
GGCAGTGCAT GCTGGATTAA AAAGCAAGTG ACGCGTCAAA CTCGTCATGC TGCAGAAGTC 
CTAACGGAAG AATGGAAGAT TGCCCCACCG CCTTTAGAGG TTGCGTACTT CTGCGATCAA 
GTGTCTGATG TTGAAAAACA CCTCGCACAA TTAGACGCTC GCTTGACGCA ATTATTACAG 
ACAGCATCAA TGGAGCGCGC ATGA
 
Protein sequence
MPLDPFVTGV IETGLNALLK ESPESKAALH RLKEKIIHVH LNEFNKDLYF IFSQQHVDIL 
SKFEGEVDCY LALNLSVLPQ LREQNNITQL IKQDKLVLEG DLNLAQQFSA LLTELKPDVE 
EKLSQYTGDI VAHTLVSGVK GSACWIKKQV TRQTRHAAEV LTEEWKIAPP PLEVAYFCDQ 
VSDVEKHLAQ LDARLTQLLQ TASMERA