Gene VSAL_I2988 details

Gene Information

• Locus tag: VSAL_I2988
• Symbol: thiH
• ID: 6989284
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aliivibrio salmonicida LFI1238
• Kingdom: Bacteria
• Replicon accession: NC_011312
• Strand: +
• Start bp: 3235316
• End bp: 3236428
• Gene Length: 1113 bp
• Protein Length: 370 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 643381265
• Product: thiamine biosynthesis protein ThiH
• Protein accession: YP_002264313
• Protein GI: 209696382
• COG category: [H] Coenzyme transport and metabolism; [R] General function prediction only
• COG ID: [COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes
• TIGRFAM ID: [TIGR02351] thiazole biosynthesis protein ThiH

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGTTTA CTGATGAATG GAAAAAACTG AATTGGGATG AGGTCAAACT CTCCATCTAC 
AGTAAAACAG CGCAAGACGT AGAAAGAGCG CTGAACAAAC CAAAGCGCAA TTTAGACGAT 
TTTAAAGCGT TAATCTCACC AGCCGCTGAA GGGTATTTAG AGCAAATGGC TCAAGAGTCC 
GCACGACTGA CTCGCCAGCG ATTTGGTCAT ACCATGGGGT TTTATATTCC TCTTTATCTT 
TCGAACCTAT GTGCAAACGC GTGTACTTAT TGTGGGTTCT CGATGGAGAA TCGAATTAAA 
CGAAAGACCT TGAATCAAGA TGAAATTGCT AATGAGATTG ATGCGATTAA AGCGATGAAT 
TTTGACAGTG TACTTTTGGT GACTGGAGAG CATGAAACCA AAGTTGGGAT GAATTATTTC 
CGTGATACGG TTCCTCAAAT TAAGCGGTCA TTTAATTATT TGGCCATGGA AGTTCAACCA 
TTAGATCAAC ACGAATACGC AGAACTAAAA ACATTGGGTT TAGATGCCGT GATGGTGTAC 
CAAGAAACGT ACCATCCATC GACGTATGCG GAACATCATT TGCGAGGTAA CAAAACGGAC 
TTTAACTACC GCTTAGAAAC GCCGGACCGA TTAGCCAAAG CAGGGATTGA TAAAATAGGC 
ATTGGTGCCT TGATTGGTTT AGAAGAGTGG CGCACCGATT GTTTTTATGT GGCTGCGCAT 
TTAGATTACT TGGAGCGTAC GTACTGGCAA ACAAGGTACT CGATTTCCTT TCCACGTTTG 
CGTCCATGTG AAGGCGCTTT GCAACCCAAA TCAATCATGA GTGATAAACA GCTTGTGCAG 
TTAATCTGTG CATACCGTTT GTTAAATTCG GAAGTTGAAT TGTCACTGTC TACTCGTGAG 
TCTGAACATT TTAGAAATAA TGTATTACCG CTTGGTATTA CCTCTGTTTC TGCAGCATCA 
AAAACTCAAC CTGGAGGTTA TGCAAATAAC GAAGAGGCAT TAGAGCAATT TGCTATTAGT 
GATGAGCGTT CAGCGTCTGC GGTTGCACAA GCGGTAAAGG CGAGGGGATT TGAACCGGTG 
TGGAAAGATT GGGAGCGAAG TTATTCGGGT TAG 

 

Protein sequence

MTFTDEWKKL NWDEVKLSIY SKTAQDVERA LNKPKRNLDD FKALISPAAE GYLEQMAQES 
ARLTRQRFGH TMGFYIPLYL SNLCANACTY CGFSMENRIK RKTLNQDEIA NEIDAIKAMN 
FDSVLLVTGE HETKVGMNYF RDTVPQIKRS FNYLAMEVQP LDQHEYAELK TLGLDAVMVY 
QETYHPSTYA EHHLRGNKTD FNYRLETPDR LAKAGIDKIG IGALIGLEEW RTDCFYVAAH 
LDYLERTYWQ TRYSISFPRL RPCEGALQPK SIMSDKQLVQ LICAYRLLNS EVELSLSTRE 
SEHFRNNVLP LGITSVSAAS KTQPGGYANN EEALEQFAIS DERSASAVAQ AVKARGFEPV 
WKDWERSYSG