Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I2976 |
Symbol | trkH |
ID | 6988004 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 3223557 |
End bp | 3225014 |
Gene Length | 1458 bp |
Protein Length | 485 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 643381251 |
Product | Trk system potassium uptake protein TrkH |
Protein accession | YP_002264301 |
Protein GI | 209696370 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0168] Trk-type K+ transport systems, membrane components |
TIGRFAM ID | [TIGR00933] potassium uptake protein, TrkH family |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGTTTC GATCAATAAT CCGCATTGTG GGTATTTTAC TCGCGGTGTT CAGTTTTTTC ATGTTAGCTC CCGCTCTTGT CGCGTTTATT TATCGTGATG GTGCTGGTGT GCCTTTTGTT ATTACTTTTT TCTTGTTACT TGCCGGTGGA GGGCTACTTT GGTTCCCCAA TAGACAGCAT AAACAAGAGT TAAAATCTCG CGATGGGTTT CTCATTGTGG TCTTATTTTG GATGGTAATT GGTAGTGCGG GTGCATTGCC GTTTTTATTA TCTGGTTCAC CTGATATTTC GATAACCAAT GCCTTTTTTG AGTCCTTTTC TGGTTTGACG ACAACAGGTG CTACCGTTCT TACGGGATTA GACCACTTAC CAAAAGCGAT TTTATTCTAT CGACAACTGC TTCAGTGGTT TGGCGGTATG GGTATCATTG TACTCGCCGT TGCGATTCTT CCTGTTCTTG GTATCGGTGG GATGCAGCTT TATCGTGCTG AAATCCCTGG GCCGGTAAAA GATTCTAAGA TGACTCCGCG AATAGCTGAA ACGGCTAAGG TGCTTTGGTA TATCTACTTA ACATTAACCA TTGCTTGTAC ATTGGCATTT TGGGCGGCGG GGATGGATTG GTTTGACGCC ATCACTCATA GTTTCTCAAC AATTGCTATT GGTGGTTTCT CTACCCATGA TGCCAGTATG GGGTATTTCA ATAGCCCCGT AATTAATGCC ATTACAGTGG TGTTTTTACT TATTTCAGCG TGTAACTTCT CTCTACACTT TGCCGCTTTT GCGTCTGGTG GTGTGCATCC CAAGTATTAT TGGAAAGATC CAGAATTCAG AGCATTTATC TTCATTCAAG TGTTGTTATT TTTAATTACG TTTTTGTTGT TATTAAAACA CAGTACTTAT GATTCGATTG GTACTGCGGT TGATCAGGCG TTATTTCAAA CCGTTTCTAT CTCAACAACG GCGGGTTTTA CAACCACCAG TTTTGCTGAG TGGCCATTAT TTTTACCTGT GTTGTTGCTG TTTTCTTCAT TTATTGGTGG TTGTGCGGGG TCTACTGGCG GCGGAATGAA AGTGATACGT ATTTTGTTAC TGTCATTACA AGGAATGCGT GAGCTTAAAC GATTGATTCA CCCAAGAGCC ATTTATACGA TTAAGATTGG CAGCAAGGCA TTACCACAAC GAGTGGTTGA TGCTGTATGG GGATTTTTCT CTGCTTATAC ATTAGTGTTC GTCATTTGTA TGTTGGCATT GATTGCGACA GGCATTGATG AATTGACCGC ATTCTCAGCG GTGGCGGCAA CATTAAACAA TTTAGGGCCT GGTTTAGGTG AGGTTGCTGT ACACTTTGGT GATATAAATG ATTCAGCGAA ATGGATTTTA ATCATCTCGA TGTTATTTGG TCGTTTGGAA GTGTTTACAC TCCTTATTTT ATTTACGCCG ACGTTTTGGC GTAGTTAA
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Protein sequence | MQFRSIIRIV GILLAVFSFF MLAPALVAFI YRDGAGVPFV ITFFLLLAGG GLLWFPNRQH KQELKSRDGF LIVVLFWMVI GSAGALPFLL SGSPDISITN AFFESFSGLT TTGATVLTGL DHLPKAILFY RQLLQWFGGM GIIVLAVAIL PVLGIGGMQL YRAEIPGPVK DSKMTPRIAE TAKVLWYIYL TLTIACTLAF WAAGMDWFDA ITHSFSTIAI GGFSTHDASM GYFNSPVINA ITVVFLLISA CNFSLHFAAF ASGGVHPKYY WKDPEFRAFI FIQVLLFLIT FLLLLKHSTY DSIGTAVDQA LFQTVSISTT AGFTTTSFAE WPLFLPVLLL FSSFIGGCAG STGGGMKVIR ILLLSLQGMR ELKRLIHPRA IYTIKIGSKA LPQRVVDAVW GFFSAYTLVF VICMLALIAT GIDELTAFSA VAATLNNLGP GLGEVAVHFG DINDSAKWIL IISMLFGRLE VFTLLILFTP TFWRS
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