| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2974 |
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| Symbol | fadB |
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| ID | 6988472 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 3220462 |
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| End bp | 3222642 |
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| Gene Length | 2181 bp |
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| Protein Length | 726 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 643381249 |
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| Product | multifunctional fatty acid oxidation complex subunit alpha |
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| Protein accession | YP_002264299 |
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| Protein GI | 209696368 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | [TIGR02437] fatty oxidation complex, alpha subunit FadB |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTTATC AAGGTGAAAA CCTCTCTGTA GATTACATCG AAAACGGCAT TGCTCACTTA
GTCTTTAATG CGGCTGGCAG TGTTAATAAA CTCAATATTG CTACCCTACG CTCACTAGGT
GAAGCCATTG ATGTTCTCTA TAAGCAAAAG GATTTACAAG CACTGTTACT TTCATCAGGT
AAAAGTGCTT TCATTGTTGG TGCTGACATT ACGGAGTTCT TAGGGTTGTT TGATACACCA
GAAGAAGAAC TCAGTGATTG GCTGCATCAA GCTAATGTGA TTTTTAGCCG ACTGGAAGAT
CTTCCTGTAC CGACATTATC TGCAATTACT GGCTTTGCTC TGGGCGGTGG TTGTGAATGT
GTACTTGCTA CGGATTTTCG ATTGGCGGAT GACACCGCGT CGATTGGCCT ACCAGAAACC
CAACTAGGTA TAATGCCTGG CTGGGGCGGT TCTGTTCGTT TACCTCGCTT AATTGGTGCC
GATCCCGCAA TGGAAGTCAT CACAACAGGT AAACCAAAAC GCGCTAAAGA TGCATTAAAA
ATAGGAATGG TCGACGGTAT TGTTTCACGT GAAACATTGA TTGATGCCTC AGTATCTATG
CTAAAACAAG CGATCGATGG TCAACTAAAT TGGCAACAAC GTCGTGAACA AAAGAAAGCC
CCTATTCAGT TATCCCCTCT AGAAGCGGCT ATGTCGTTCA ATGTCGCCAA AGGCATGATA
ATGAAAATGG CTGGGAAACA TTATCCTGCA CCACTAACTG CCGTTAAATC TATCGAGCAA
AGTGCAAACA TGCATCGTGA TGACGCTTTG GCGATTGAGA ACAAACACTT CGTGGCTCTC
ACTCGTACTG ACGTCGCGAA ATCATTGGTT GGTATTTTCT TAAATGACCA ATTAGTAAAA
AGCAAAGCAA AGCAAGCCGT CAAAAACAGC GAGCCAGTTA AAAATGCCGC GGTACTCGGC
GCAGGGATCA TGGGCGGTGG TATAGCTTAT CAATCGGCAT CAAAAGGCGT GCCTGTCTTA
ATGAAAGACA TTGCACAAGC GTCATTAGAT TTAGGGATGA ACGAAGCCTC GAAACTGCTT
AATAAGCAAT TAGAGCGCGG GCGATTATCT GGACTAAAAA TGGCACAAGT ACTTTCATCT
ATCACACCAT CACTCAATTA TGGTGGCATA GAGACAAAAG ACGTTATCGT TGAAGCCGTC
GTCGAAAACC CAACCATCAA AGCAGCGGTA TTAGCTGAAG TAGAAAATGA AGTTAATGAA
CACGCCATCT TAGCGTCGAA TACCTCAACT ATTCCAATTT CACTGCTCGC TAAATCATTA
AAACGTCCTG AAAACTTCTG TGGTATGCAT TTCTTTAACC CTGTTCATAG AATGCCATTA
GTGGAAGTTA TTCGTGGCGA GAAAACCTCA CAACAAACCA TTGATCGCGT AGTGGCTTAT
GCTTCTCAAA TGGGCAAAAC ACCCATCGTT GTGAATGATT GTCCAGGGTT CTTTGTGAAC
CGTGTTCTTT TTCCTTATTT TGCTGGCTTT AGTTTATTAC TGCGTGATGG CGGGAATTAC
CAACAAATCG ATAAAGTGAT GGAAAAAGAA TTTGGCTGGC CAATGGGCCC TGCTTATTTG
CTAGATGTCG TGGGGATTGA TACCGCCCAT CATGCACAAG CGGTGATGGC GCAAGGTTTC
CCTGAACGCA TGGCGAAAAA TGGCCGAGAT GTTATCGATG CGATGTTTGA AGATGATCGC
TATGGCCAAA AAAATGGAAT TGGCTTCTAT GCTTATGCCC TTGATAAAAA AGGCAAGCCG
AAGAAAAACA TTGATGAAAA AACCAATGCA ATTATCGCAA CAATAACCGA TTCAACTCAA
CCTTACACCT CTGAGCAAAT TAGCGCTCGT ATGATGATCC CAATGATTAA CGAAGTCATT
CGTTGTTTAG ATGAGGGTAT TATCGCTTCT CCAGCAGAGG CTGACATGGC CTTAGTGTAT
GGGTTAGGTT TTCCTCCATT TAAAGGCGGC GTATTCCGCT ACCTGGATTC TATCGGTCTA
GACACGTATT TAGACATGGC CAAAGAGTTT GAGCAATTAA GTCCGGTTTA CCAAGTGCCT
GACAGCATCA AACAAAAAGC AGCGGCTGGA GAGTGTTATT ACCCAGCCCC GAAATCATCT
GTTTCATCAC CATCGGTTTA A
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| Protein sequence | MIYQGENLSV DYIENGIAHL VFNAAGSVNK LNIATLRSLG EAIDVLYKQK DLQALLLSSG
KSAFIVGADI TEFLGLFDTP EEELSDWLHQ ANVIFSRLED LPVPTLSAIT GFALGGGCEC
VLATDFRLAD DTASIGLPET QLGIMPGWGG SVRLPRLIGA DPAMEVITTG KPKRAKDALK
IGMVDGIVSR ETLIDASVSM LKQAIDGQLN WQQRREQKKA PIQLSPLEAA MSFNVAKGMI
MKMAGKHYPA PLTAVKSIEQ SANMHRDDAL AIENKHFVAL TRTDVAKSLV GIFLNDQLVK
SKAKQAVKNS EPVKNAAVLG AGIMGGGIAY QSASKGVPVL MKDIAQASLD LGMNEASKLL
NKQLERGRLS GLKMAQVLSS ITPSLNYGGI ETKDVIVEAV VENPTIKAAV LAEVENEVNE
HAILASNTST IPISLLAKSL KRPENFCGMH FFNPVHRMPL VEVIRGEKTS QQTIDRVVAY
ASQMGKTPIV VNDCPGFFVN RVLFPYFAGF SLLLRDGGNY QQIDKVMEKE FGWPMGPAYL
LDVVGIDTAH HAQAVMAQGF PERMAKNGRD VIDAMFEDDR YGQKNGIGFY AYALDKKGKP
KKNIDEKTNA IIATITDSTQ PYTSEQISAR MMIPMINEVI RCLDEGIIAS PAEADMALVY
GLGFPPFKGG VFRYLDSIGL DTYLDMAKEF EQLSPVYQVP DSIKQKAAAG ECYYPAPKSS
VSSPSV
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