Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I2972 |
Symbol | |
ID | 6988002 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 3217530 |
End bp | 3218510 |
Gene Length | 981 bp |
Protein Length | 326 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 643381247 |
Product | putative zinc-binding alcohol dehydrogenase |
Protein accession | YP_002264297 |
Protein GI | 209696366 |
COG category | [C] Energy production and conversion [R] General function prediction only |
COG ID | [COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases |
TIGRFAM ID | [TIGR02823] putative quinone oxidoreductase, YhdH/YhfP family |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.886983 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTAAAG CACTCATTTT GAATCAAGAA GAAAAAAACA CTATTGCCGC AGTTACTGAA ATCGATGAAT CTCAACTGCC AGAAGGCAAT GTGAAAATTG ATGTTAGCTA CTCTTCTCTT AACTATAAAG ACGGTTTAGC GATTACAGGT AAAGGGCGTA TTGTTCGTAA CTTCCCGATG ATCCCTGGTG TTGACTTAGC CGGTGTCGTT TCTCACTCTG ATGATGCTCG CTACAAAGCA GGCGATGAAG TCGTTCTTAC TGGTTGGGGG GTTGGCGAAG GTCACTGGGG CGGCATGGCT GAAAAAGCAA GCCTAAACGG TGATTGGTTA GTTCCTATGC CAAAAGGCCT AGACGCTAAA AAAGTCATGG CGATTGGTAC TGCCGGCTTT ACTGCAATGC TATGTGTACA AGCGATTGTT GATGCAGGCA TTAACCCAGA AGACGGTGAA ATTTTAGTGA CAGGATCAAG CGGCGGTGTG GGTAGCCTGT CTATCACATT GTTAAACCAA CTTGGTTATA AAGTAGCGGC AGTAACAGGC CGAGCTTCTG AAAATGGCGA GCTACTTAAA TCACTAGGAG CAACTCGTAT TGTTGAACGT AGTGAATTAG AAGAACCAGC AAAACCACTA GAAAAACAAC TGTGGGCTGG CGCGATTGAT ACCGTTGGCA GTAAAGTACT TGCTAAAGTA TTAGCTCAGA TAAATTACAA CGGTGCCGTA GCGGCGTGTG GCCTTGCGGG TGGATTCGAT CTACCAACAA CAGTCATGCC ATTCATCCTA CGTAACGTTC GTTTACAAGG TATCGATTCG GTTATGTGCC CTCGCGAAAA ACGCATTAAA GCATGGGAAC AACTATCTAC GCTTCTTCCT GAGTCATTTT ATGCTCAAGC AACAAAAGAA GTATCATTAG ATGGTGCTAT CCAAGCTGCT GAAGACATTA CGAACGGTCA AATTACAGGT CGTGTCGTTA TCAAAATCTA G
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Protein sequence | MFKALILNQE EKNTIAAVTE IDESQLPEGN VKIDVSYSSL NYKDGLAITG KGRIVRNFPM IPGVDLAGVV SHSDDARYKA GDEVVLTGWG VGEGHWGGMA EKASLNGDWL VPMPKGLDAK KVMAIGTAGF TAMLCVQAIV DAGINPEDGE ILVTGSSGGV GSLSITLLNQ LGYKVAAVTG RASENGELLK SLGATRIVER SELEEPAKPL EKQLWAGAID TVGSKVLAKV LAQINYNGAV AACGLAGGFD LPTTVMPFIL RNVRLQGIDS VMCPREKRIK AWEQLSTLLP ESFYAQATKE VSLDGAIQAA EDITNGQITG RVVIKI
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