Gene VSAL_I2965 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I2965 
SymbolglyS 
ID6988610 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand
Start bp3209940 
End bp3212006 
Gene Length2067 bp 
Protein Length688 aa 
Translation table11 
GC content44% 
IMG OID643381240 
Productglycyl-tRNA synthetase subunit beta 
Protein accessionYP_002264290 
Protein GI209696359 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0751] Glycyl-tRNA synthetase, beta subunit 
TIGRFAM ID[TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.425514 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGAAGA ATTTTCTAAT CGAATTAGGT ACAGAAGAGC TTCCACCGAA AGCACTTCGT 
TCATTAGCTG AAGCGTTTGC TGCAAATTTT GAAGCCGGCC TTAAAGCGGC TGGTTTAGCT
CATCAAGGCA TTAAGTGGTA TGCAACGCCT CGTCGTTTAG CGCTTAAAAT CGCTGAATTA
GATGAAGGCC AAGCAGACAA AATCGTTGAA AAGCGTGGTC CTGCAATCGC TTCTGCATTT
GATGCTGACG GTAATCCAAC TAAAGCAGCT CAAGGCTGGG CTCGTGGTAA CGGTATTACG
GTTGAGCAGG CTGAGCGTCT AAAAACAGAC AAAGGCGAAT GGCTACTTCA TAAAGAAGAA
GTAAAAGGCC AACCGGTTAA AGGACTTGTT GTTGAATTAG CAGCAAAAGC CCTGGCTGGT
TTACCAATTC CTAAAGCAAT GCGTTGGGGT AACTCAGACA TTCAATTTAT TCGTCCAGTG
AAAACACTGA CAATCCTATT GGGTGACGAA CTGATTGAAG GCACTATCTT AGGTGTTGCT
TCTACTCGTA CTATCCGTGG CCACCGTTTC ATGGGTGAAA GCGAGTTTAC GATTGATTCT
GCTGACCAAT ACCCTGCGAT CTTAGAAGAA CGCGGTAAAG TAATGGCTGA CTACGATGCG
CGTAAAGCCA TCATCCTTGC TGGTGCTAAA AAAGCAGCAG AAGCGGTTGG CGGTATTGCG
GATCTAGAAG ACGAATTAGT TGAAGAAGTT ACGTCTCTTG TTGAATGGCC AGTGGTATTG
ACCGCTAAGT TTGAGCAAGA GTTCTTGAAT GTTCCTTCTG AAGCGTTGGT TTACACAATG
AAGGGCGATC AAAAGTACTT CCCTGTGTAC GACCAAGAGA AGAACCTACT TCCTAACTTC
ATCTTTGTTA CTAACATCGA ATCTAAAGAA CCTCGTCATA TTATCGAAGG TAATGAGAAA
GTGGTTCGCC CACGTCTTGC TGATGCTGAA TTCTTCTTCA ATACAGACCG TAAGCGCCCG
CTTATCGATC GTCTGCCAGA ACTAGAACAA GCAATATTCC AGAAGCAATT GGGCACAATC
AAAGACAAAA CAGACCGTAT TACTGAACTT GCTGGCTACA TCGCTGAGCA AATTGGTGCG
GACGTTGAGA AATCGCAACG TGCAGGTCTT TTAGCTAAGT GTGACTTAAT GACCTCAATG
GTATTTGAAT TTACAGATAC TCAAGGTGTT ATGGGTATGC ACTACGCAAC TCATGATGGT
GAAGATGCAC AAGTCGCATT AGCGCTTTAC GAGCAATACA TGCCTCGTTT CGCGGGTGAT
GACTTACCAA GTACCGATGT TTCTGCATCA GTAGCAATGG CAGATAAGCT AGATACGCTA
GTGGGTATCT TCGGCATTGG TCAAGCTCCT AAGGGGTCTG ATCCATTTGC ACTTCGTCGT
GCTGCGTTAG GTATCTTACG TATCATCGTT GAAAAAGGGT ACAACTTAGA TTTAGTTGAC
CTTGTTGCTA AAGCACAATC TTTGTTTGGC GATAAATTAA CGAATGCAAA CGTAGACACT
GATGTGATTG ATTTCATGTT AGGCCGTTTC CGTGCATGGT ATCAAGATGA AGGTTTCAGC
GTAGATATCA TCCAAGCGGT ACTTGCTCGT CGTCCAACCA AGCCTGCTGA TTTTGATCAA
CGTGTGAAAG CGGTATCTCA CTTCCGTGAA TTAGACGCGG CTGAGTCTCT AGCGGCAGCG
AATAAGCGCG TAGGTAATAT CCTGGCGAAA TTCGATGGCG AACTGGCTCA AGAAATCGAT
CTAGCTCTTC TTCAAGAAGA CGCTGAGAAA GTATTGGCTG AGAAAGTTGA AATTCTAGCA
GAAGCACTAG AGCCAGTATT TATTGCTGGT AATTATCAAG AAGCATTAAG CCGCCTAGCT
GAGCTACGTG AGCCTGTCGA TGCGTTCTTT GATGGTGTAA TGGTAATGGC TGACGATGAG
GCGCTTAAGC TGAATCGTCT AACTTTGCTG AATAAGCTAC GTAACTTATT CTTAGATATT
GCTGATATTT CTCTTCTTCA AAAATAG
 
Protein sequence
MAKNFLIELG TEELPPKALR SLAEAFAANF EAGLKAAGLA HQGIKWYATP RRLALKIAEL 
DEGQADKIVE KRGPAIASAF DADGNPTKAA QGWARGNGIT VEQAERLKTD KGEWLLHKEE
VKGQPVKGLV VELAAKALAG LPIPKAMRWG NSDIQFIRPV KTLTILLGDE LIEGTILGVA
STRTIRGHRF MGESEFTIDS ADQYPAILEE RGKVMADYDA RKAIILAGAK KAAEAVGGIA
DLEDELVEEV TSLVEWPVVL TAKFEQEFLN VPSEALVYTM KGDQKYFPVY DQEKNLLPNF
IFVTNIESKE PRHIIEGNEK VVRPRLADAE FFFNTDRKRP LIDRLPELEQ AIFQKQLGTI
KDKTDRITEL AGYIAEQIGA DVEKSQRAGL LAKCDLMTSM VFEFTDTQGV MGMHYATHDG
EDAQVALALY EQYMPRFAGD DLPSTDVSAS VAMADKLDTL VGIFGIGQAP KGSDPFALRR
AALGILRIIV EKGYNLDLVD LVAKAQSLFG DKLTNANVDT DVIDFMLGRF RAWYQDEGFS
VDIIQAVLAR RPTKPADFDQ RVKAVSHFRE LDAAESLAAA NKRVGNILAK FDGELAQEID
LALLQEDAEK VLAEKVEILA EALEPVFIAG NYQEALSRLA ELREPVDAFF DGVMVMADDE
ALKLNRLTLL NKLRNLFLDI ADISLLQK