Gene VSAL_I2954 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I2954 
Symbol 
ID6987990 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand- 
Start bp3200094 
End bp3200681 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content40% 
IMG OID643381231 
Producthypothetical protein 
Protein accessionYP_002264281 
Protein GI209696350 
COG category[S] Function unknown 
COG ID[COG3148] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTTGTT CAATTTGTGG ATTTACCTAT AACTGTATTT GCTCTCATCA GCCAAATTTA 
ATCTCGCACA TTGAATTTGC GCTGCTGTAC CATGAGAACG AACAAAAAAA ATTAACCAAT 
ACCGGTAAGT TGATAACAAA CAGCTTACCG AACGCTCGGG CTTATTTATG GCAACGTAAA 
GAGCTGCCAA CCGCACTACT AGAAAAAATA GCGCGAGATG ATACTGAGAC ATGGTTACTT 
TTTCCAAGTA CGGAAAACAC ACTCAGTACA GAATATGCCA ATGCAAAGAC CTCATCCAAA 
AAGCAGTTGT TTATTTTACT TGATGCGACC TGGCAAGAAG CGAAAAAAAT GGTCAACAAA 
AGCCCTTGGT TACAAGAACT TCCTTGTTTG TATTTAGAGA GTGTCGATAC CTCAAGCTAT 
CATTTACGTC GAAATCAAAG CGAAGGCAAT CTGTGCACTT GTGAAGCGGG AATGGAAATA 
TTAAAGATGG TAAAAGAGCC TGAAAATGCA CAGGCTCTTA ATCTGTATTA CGAGCGATTT 
TTAACCGTTT TTCAAGCAGA ACGCAGTGGT CACCTTTACG TCGAATGA
 
Protein sequence
MSCSICGFTY NCICSHQPNL ISHIEFALLY HENEQKKLTN TGKLITNSLP NARAYLWQRK 
ELPTALLEKI ARDDTETWLL FPSTENTLST EYANAKTSSK KQLFILLDAT WQEAKKMVNK 
SPWLQELPCL YLESVDTSSY HLRRNQSEGN LCTCEAGMEI LKMVKEPENA QALNLYYERF 
LTVFQAERSG HLYVE